Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13580 and BWI76_RS13585 are separated by 68 nucleotides BWI76_RS13585 and BWI76_RS13590 are separated by 246 nucleotides BWI76_RS13590 and BWI76_RS13595 are separated by 75 nucleotides BWI76_RS13595 and BWI76_RS13600 are separated by 79 nucleotides BWI76_RS13600 and BWI76_RS13605 are separated by 40 nucleotides
BWI76_RS13580: BWI76_RS13580 - glutathione S-transferase domain protein, at 2,831,794 to 2,832,411
_RS13580
BWI76_RS13585: BWI76_RS13585 - 4-oxalocrotonate tautomerase, at 2,832,480 to 2,832,707
_RS13585
BWI76_RS13590: BWI76_RS13590 - hypothetical protein, at 2,832,954 to 2,833,271
_RS13590
BWI76_RS13595: BWI76_RS13595 - transcriptional regulator, at 2,833,347 to 2,833,643
_RS13595
BWI76_RS13600: BWI76_RS13600 - hypothetical protein, at 2,833,723 to 2,834,169
_RS13600
BWI76_RS13605: BWI76_RS13605 - porin, at 2,834,210 to 2,835,814
_RS13605
Position (kb)
2832
2833
2834 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2832.196 kb on - strand, within BWI76_RS13580 at 2832.609 kb on - strand, within BWI76_RS13585 at 2832.621 kb on + strand, within BWI76_RS13585 at 2832.631 kb on + strand, within BWI76_RS13585 at 2832.707 kb on + strand at 2832.744 kb on + strand at 2833.122 kb on + strand, within BWI76_RS13590 at 2833.127 kb on + strand, within BWI76_RS13590 at 2833.216 kb on + strand, within BWI76_RS13590 at 2833.333 kb on + strand at 2833.437 kb on + strand, within BWI76_RS13595 at 2833.437 kb on + strand, within BWI76_RS13595 at 2833.437 kb on + strand, within BWI76_RS13595 at 2833.437 kb on + strand, within BWI76_RS13595 at 2833.437 kb on + strand, within BWI76_RS13595 at 2833.477 kb on + strand, within BWI76_RS13595 at 2833.480 kb on + strand, within BWI76_RS13595 at 2833.485 kb on + strand, within BWI76_RS13595 at 2833.486 kb on + strand, within BWI76_RS13595 at 2833.486 kb on + strand, within BWI76_RS13595 at 2833.486 kb on + strand, within BWI76_RS13595 at 2833.515 kb on + strand, within BWI76_RS13595 at 2833.525 kb on + strand, within BWI76_RS13595 at 2833.525 kb on + strand, within BWI76_RS13595 at 2833.525 kb on + strand, within BWI76_RS13595 at 2833.536 kb on + strand, within BWI76_RS13595 at 2833.567 kb on + strand, within BWI76_RS13595 at 2833.567 kb on + strand, within BWI76_RS13595 at 2833.579 kb on + strand, within BWI76_RS13595 at 2833.599 kb on + strand, within BWI76_RS13595 at 2833.673 kb on + strand at 2833.673 kb on + strand at 2833.722 kb on - strand at 2833.781 kb on + strand, within BWI76_RS13600 at 2833.781 kb on + strand, within BWI76_RS13600 at 2833.859 kb on + strand, within BWI76_RS13600 at 2833.920 kb on + strand, within BWI76_RS13600 at 2834.133 kb on + strand at 2834.144 kb on + strand at 2834.150 kb on + strand at 2834.173 kb on + strand at 2834.212 kb on - strand at 2834.240 kb on - strand at 2834.248 kb on - strand at 2834.248 kb on - strand at 2834.251 kb on - strand at 2834.271 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 2,832,196 - BWI76_RS13580 0.65 -1.1 2,832,609 - BWI76_RS13585 0.57 -0.5 2,832,621 + BWI76_RS13585 0.62 -0.0 2,832,631 + BWI76_RS13585 0.66 +0.6 2,832,707 + +0.0 2,832,744 + -1.2 2,833,122 + BWI76_RS13590 0.53 -0.5 2,833,127 + BWI76_RS13590 0.54 -2.4 2,833,216 + BWI76_RS13590 0.82 -1.1 2,833,333 + +1.9 2,833,437 + BWI76_RS13595 0.30 +0.7 2,833,437 + BWI76_RS13595 0.30 +0.1 2,833,437 + BWI76_RS13595 0.30 -1.2 2,833,437 + BWI76_RS13595 0.30 -0.2 2,833,437 + BWI76_RS13595 0.30 -0.2 2,833,477 + BWI76_RS13595 0.44 +1.0 2,833,480 + BWI76_RS13595 0.45 -1.9 2,833,485 + BWI76_RS13595 0.46 +0.2 2,833,486 + BWI76_RS13595 0.47 +0.6 2,833,486 + BWI76_RS13595 0.47 -0.5 2,833,486 + BWI76_RS13595 0.47 +0.4 2,833,515 + BWI76_RS13595 0.57 +0.0 2,833,525 + BWI76_RS13595 0.60 +0.6 2,833,525 + BWI76_RS13595 0.60 -0.1 2,833,525 + BWI76_RS13595 0.60 -0.3 2,833,536 + BWI76_RS13595 0.64 +0.8 2,833,567 + BWI76_RS13595 0.74 -0.0 2,833,567 + BWI76_RS13595 0.74 +0.2 2,833,579 + BWI76_RS13595 0.78 +0.8 2,833,599 + BWI76_RS13595 0.85 +0.0 2,833,673 + -0.6 2,833,673 + -1.4 2,833,722 - +0.2 2,833,781 + BWI76_RS13600 0.13 -0.7 2,833,781 + BWI76_RS13600 0.13 +1.2 2,833,859 + BWI76_RS13600 0.30 -0.1 2,833,920 + BWI76_RS13600 0.44 +0.7 2,834,133 + +0.7 2,834,144 + -0.4 2,834,150 + +0.2 2,834,173 + +0.7 2,834,212 - +0.0 2,834,240 - -0.1 2,834,248 - -0.8 2,834,248 - +0.2 2,834,251 - +0.3 2,834,271 - +1.7
Or see this region's nucleotide sequence