Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12690 and BWI76_RS12695 are separated by 342 nucleotides BWI76_RS12695 and BWI76_RS12700 are separated by 277 nucleotides BWI76_RS12700 and BWI76_RS12705 overlap by 50 nucleotides
BWI76_RS12690: BWI76_RS12690 - LuxR family transcriptional regulator, at 2,645,807 to 2,646,415
_RS12690
BWI76_RS12695: BWI76_RS12695 - zinc transporter ZntB, at 2,646,758 to 2,647,741
_RS12695
BWI76_RS12700: BWI76_RS12700 - hypothetical protein, at 2,648,019 to 2,648,273
_RS12700
BWI76_RS12705: BWI76_RS12705 - ATP-dependent RNA helicase, at 2,648,224 to 2,649,597
_RS12705
Position (kb)
2646
2647
2648 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2645.758 kb on - strand at 2645.797 kb on + strand at 2645.801 kb on + strand at 2645.900 kb on + strand, within BWI76_RS12690 at 2645.903 kb on + strand, within BWI76_RS12690 at 2645.940 kb on + strand, within BWI76_RS12690 at 2645.940 kb on + strand, within BWI76_RS12690 at 2645.940 kb on + strand, within BWI76_RS12690 at 2645.940 kb on + strand, within BWI76_RS12690 at 2645.940 kb on + strand, within BWI76_RS12690 at 2645.948 kb on - strand, within BWI76_RS12690 at 2645.948 kb on - strand, within BWI76_RS12690 at 2645.948 kb on - strand, within BWI76_RS12690 at 2645.948 kb on - strand, within BWI76_RS12690 at 2645.973 kb on + strand, within BWI76_RS12690 at 2646.078 kb on + strand, within BWI76_RS12690 at 2646.078 kb on + strand, within BWI76_RS12690 at 2646.078 kb on + strand, within BWI76_RS12690 at 2646.078 kb on + strand, within BWI76_RS12690 at 2646.078 kb on + strand, within BWI76_RS12690 at 2646.078 kb on + strand, within BWI76_RS12690 at 2646.086 kb on - strand, within BWI76_RS12690 at 2646.086 kb on - strand, within BWI76_RS12690 at 2646.086 kb on - strand, within BWI76_RS12690 at 2646.145 kb on + strand, within BWI76_RS12690 at 2646.211 kb on + strand, within BWI76_RS12690 at 2646.261 kb on + strand, within BWI76_RS12690 at 2646.261 kb on + strand, within BWI76_RS12690 at 2646.261 kb on + strand, within BWI76_RS12690 at 2646.267 kb on - strand, within BWI76_RS12690 at 2646.360 kb on + strand at 2646.360 kb on + strand at 2646.360 kb on + strand at 2646.360 kb on + strand at 2646.396 kb on + strand at 2646.396 kb on + strand at 2646.397 kb on + strand at 2646.404 kb on - strand at 2646.404 kb on - strand at 2646.499 kb on + strand at 2646.534 kb on + strand at 2646.534 kb on + strand at 2646.534 kb on + strand at 2646.534 kb on + strand at 2646.534 kb on + strand at 2646.534 kb on + strand at 2646.534 kb on + strand at 2646.534 kb on + strand at 2646.538 kb on + strand at 2646.545 kb on + strand at 2646.548 kb on + strand at 2646.550 kb on + strand at 2646.560 kb on + strand at 2646.599 kb on + strand at 2646.601 kb on + strand at 2646.601 kb on + strand at 2646.685 kb on + strand at 2646.698 kb on - strand at 2646.725 kb on + strand at 2646.742 kb on + strand at 2646.765 kb on + strand at 2646.774 kb on + strand at 2646.779 kb on + strand at 2646.831 kb on + strand at 2646.839 kb on - strand at 2646.902 kb on - strand, within BWI76_RS12695 at 2647.035 kb on - strand, within BWI76_RS12695 at 2647.127 kb on + strand, within BWI76_RS12695 at 2647.398 kb on + strand, within BWI76_RS12695 at 2647.475 kb on - strand, within BWI76_RS12695 at 2647.581 kb on + strand, within BWI76_RS12695 at 2647.706 kb on + strand at 2647.840 kb on + strand at 2647.864 kb on + strand at 2647.872 kb on - strand at 2648.068 kb on + strand, within BWI76_RS12700 at 2648.076 kb on - strand, within BWI76_RS12700 at 2648.396 kb on + strand, within BWI76_RS12705 at 2648.424 kb on - strand, within BWI76_RS12705 at 2648.438 kb on - strand, within BWI76_RS12705 at 2648.438 kb on - strand, within BWI76_RS12705 at 2648.662 kb on + strand, within BWI76_RS12705 at 2648.673 kb on + strand, within BWI76_RS12705
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 2,645,758 - -0.7 2,645,797 + +0.7 2,645,801 + -0.4 2,645,900 + BWI76_RS12690 0.15 +1.0 2,645,903 + BWI76_RS12690 0.16 -0.1 2,645,940 + BWI76_RS12690 0.22 +0.2 2,645,940 + BWI76_RS12690 0.22 -0.7 2,645,940 + BWI76_RS12690 0.22 +0.2 2,645,940 + BWI76_RS12690 0.22 -2.1 2,645,940 + BWI76_RS12690 0.22 +0.6 2,645,948 - BWI76_RS12690 0.23 -0.7 2,645,948 - BWI76_RS12690 0.23 -0.9 2,645,948 - BWI76_RS12690 0.23 +0.3 2,645,948 - BWI76_RS12690 0.23 +0.2 2,645,973 + BWI76_RS12690 0.27 +1.0 2,646,078 + BWI76_RS12690 0.44 -0.3 2,646,078 + BWI76_RS12690 0.44 +2.6 2,646,078 + BWI76_RS12690 0.44 +1.2 2,646,078 + BWI76_RS12690 0.44 -0.9 2,646,078 + BWI76_RS12690 0.44 -3.1 2,646,078 + BWI76_RS12690 0.44 +3.1 2,646,086 - BWI76_RS12690 0.46 +0.6 2,646,086 - BWI76_RS12690 0.46 +0.3 2,646,086 - BWI76_RS12690 0.46 -0.3 2,646,145 + BWI76_RS12690 0.56 -1.1 2,646,211 + BWI76_RS12690 0.66 +0.0 2,646,261 + BWI76_RS12690 0.75 -1.0 2,646,261 + BWI76_RS12690 0.75 -0.5 2,646,261 + BWI76_RS12690 0.75 -0.6 2,646,267 - BWI76_RS12690 0.76 +0.6 2,646,360 + +0.3 2,646,360 + +1.0 2,646,360 + +1.0 2,646,360 + -0.4 2,646,396 + -0.1 2,646,396 + +1.0 2,646,397 + -0.3 2,646,404 - -1.0 2,646,404 - -3.0 2,646,499 + -0.1 2,646,534 + +0.8 2,646,534 + +0.5 2,646,534 + -0.3 2,646,534 + +0.9 2,646,534 + -0.2 2,646,534 + +0.3 2,646,534 + +0.7 2,646,534 + -0.2 2,646,538 + +0.4 2,646,545 + +0.5 2,646,548 + -0.3 2,646,550 + +1.7 2,646,560 + +0.1 2,646,599 + -0.7 2,646,601 + -0.4 2,646,601 + +1.9 2,646,685 + +0.5 2,646,698 - -0.1 2,646,725 + -0.1 2,646,742 + -0.1 2,646,765 + +0.2 2,646,774 + -0.9 2,646,779 + +0.5 2,646,831 + +0.4 2,646,839 - +0.4 2,646,902 - BWI76_RS12695 0.15 -1.5 2,647,035 - BWI76_RS12695 0.28 -2.5 2,647,127 + BWI76_RS12695 0.38 -1.4 2,647,398 + BWI76_RS12695 0.65 -0.7 2,647,475 - BWI76_RS12695 0.73 +1.5 2,647,581 + BWI76_RS12695 0.84 -1.0 2,647,706 + -0.1 2,647,840 + +0.7 2,647,864 + +0.6 2,647,872 - +1.1 2,648,068 + BWI76_RS12700 0.19 +0.3 2,648,076 - BWI76_RS12700 0.22 +0.4 2,648,396 + BWI76_RS12705 0.13 -0.5 2,648,424 - BWI76_RS12705 0.15 +0.1 2,648,438 - BWI76_RS12705 0.16 +0.5 2,648,438 - BWI76_RS12705 0.16 -0.5 2,648,662 + BWI76_RS12705 0.32 +0.4 2,648,673 + BWI76_RS12705 0.33 -0.1
Or see this region's nucleotide sequence