Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12325 and BWI76_RS12330 overlap by 1 nucleotides BWI76_RS12330 and BWI76_RS12335 overlap by 14 nucleotides BWI76_RS12335 and BWI76_RS12340 are separated by 224 nucleotides
BWI76_RS12325: BWI76_RS12325 - hypothetical protein, at 2,570,941 to 2,574,228
_RS12325
BWI76_RS12330: BWI76_RS12330 - hypothetical protein, at 2,574,228 to 2,574,701
_RS12330
BWI76_RS12335: BWI76_RS12335 - hypothetical protein, at 2,574,688 to 2,575,170
_RS12335
BWI76_RS12340: BWI76_RS12340 - molecular chaperone Tir, at 2,575,395 to 2,576,276
_RS12340
Position (kb)
2574
2575
2576 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2573.900 kb on - strand at 2574.018 kb on - strand at 2574.080 kb on + strand at 2574.081 kb on - strand at 2574.088 kb on - strand at 2574.088 kb on - strand at 2574.131 kb on - strand at 2574.145 kb on - strand at 2574.160 kb on + strand at 2574.247 kb on - strand at 2574.366 kb on - strand, within BWI76_RS12330 at 2574.386 kb on - strand, within BWI76_RS12330 at 2574.459 kb on + strand, within BWI76_RS12330 at 2574.668 kb on + strand at 2574.668 kb on + strand at 2574.675 kb on - strand at 2574.722 kb on + strand at 2574.827 kb on + strand, within BWI76_RS12335 at 2574.835 kb on - strand, within BWI76_RS12335 at 2574.843 kb on - strand, within BWI76_RS12335 at 2574.862 kb on - strand, within BWI76_RS12335 at 2575.011 kb on - strand at 2575.034 kb on - strand, within BWI76_RS12335 at 2575.034 kb on - strand, within BWI76_RS12335 at 2575.075 kb on - strand, within BWI76_RS12335 at 2575.087 kb on + strand, within BWI76_RS12335 at 2575.087 kb on + strand, within BWI76_RS12335 at 2575.091 kb on + strand, within BWI76_RS12335 at 2575.091 kb on + strand, within BWI76_RS12335 at 2575.095 kb on - strand, within BWI76_RS12335 at 2575.095 kb on - strand, within BWI76_RS12335 at 2575.099 kb on - strand, within BWI76_RS12335 at 2575.099 kb on - strand, within BWI76_RS12335 at 2575.099 kb on - strand, within BWI76_RS12335 at 2575.099 kb on - strand, within BWI76_RS12335 at 2575.115 kb on + strand, within BWI76_RS12335 at 2575.119 kb on - strand, within BWI76_RS12335 at 2575.125 kb on - strand at 2575.179 kb on + strand at 2575.186 kb on - strand at 2575.312 kb on + strand at 2575.322 kb on + strand at 2575.322 kb on + strand at 2575.322 kb on + strand at 2575.329 kb on + strand at 2575.329 kb on + strand at 2575.329 kb on + strand at 2575.329 kb on + strand at 2575.335 kb on + strand at 2575.335 kb on + strand at 2575.337 kb on - strand at 2575.355 kb on - strand at 2575.416 kb on - strand at 2575.424 kb on - strand at 2575.464 kb on - strand at 2575.585 kb on + strand at 2575.702 kb on + strand at 2575.758 kb on + strand, within BWI76_RS12340 at 2575.860 kb on + strand, within BWI76_RS12340 at 2575.861 kb on - strand, within BWI76_RS12340 at 2576.142 kb on + strand, within BWI76_RS12340 at 2576.166 kb on - strand, within BWI76_RS12340 at 2576.168 kb on + strand, within BWI76_RS12340
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 2,573,900 - +0.8 2,574,018 - +0.5 2,574,080 + +0.0 2,574,081 - +0.1 2,574,088 - -1.7 2,574,088 - -0.7 2,574,131 - +0.1 2,574,145 - -1.8 2,574,160 + +1.1 2,574,247 - +2.9 2,574,366 - BWI76_RS12330 0.29 -0.3 2,574,386 - BWI76_RS12330 0.33 -0.0 2,574,459 + BWI76_RS12330 0.49 -1.5 2,574,668 + -0.4 2,574,668 + -0.3 2,574,675 - +1.2 2,574,722 + +0.5 2,574,827 + BWI76_RS12335 0.29 -2.2 2,574,835 - BWI76_RS12335 0.30 -1.0 2,574,843 - BWI76_RS12335 0.32 -0.1 2,574,862 - BWI76_RS12335 0.36 +0.9 2,575,011 - -0.1 2,575,034 - BWI76_RS12335 0.72 -1.5 2,575,034 - BWI76_RS12335 0.72 -0.3 2,575,075 - BWI76_RS12335 0.80 +0.0 2,575,087 + BWI76_RS12335 0.83 +1.5 2,575,087 + BWI76_RS12335 0.83 -2.4 2,575,091 + BWI76_RS12335 0.83 -1.4 2,575,091 + BWI76_RS12335 0.83 -0.4 2,575,095 - BWI76_RS12335 0.84 +0.5 2,575,095 - BWI76_RS12335 0.84 +0.2 2,575,099 - BWI76_RS12335 0.85 -2.2 2,575,099 - BWI76_RS12335 0.85 -0.5 2,575,099 - BWI76_RS12335 0.85 -0.1 2,575,099 - BWI76_RS12335 0.85 +0.7 2,575,115 + BWI76_RS12335 0.88 -2.9 2,575,119 - BWI76_RS12335 0.89 -0.1 2,575,125 - -0.5 2,575,179 + -0.8 2,575,186 - -1.3 2,575,312 + -0.7 2,575,322 + +0.3 2,575,322 + +0.1 2,575,322 + +1.0 2,575,329 + -0.7 2,575,329 + -1.9 2,575,329 + -0.1 2,575,329 + +0.3 2,575,335 + -1.1 2,575,335 + -0.1 2,575,337 - +1.2 2,575,355 - -0.4 2,575,416 - -0.7 2,575,424 - +0.6 2,575,464 - -0.7 2,575,585 + +1.3 2,575,702 + +0.9 2,575,758 + BWI76_RS12340 0.41 -0.9 2,575,860 + BWI76_RS12340 0.53 +1.9 2,575,861 - BWI76_RS12340 0.53 +1.4 2,576,142 + BWI76_RS12340 0.85 +0.1 2,576,166 - BWI76_RS12340 0.87 +2.0 2,576,168 + BWI76_RS12340 0.88 -1.2
Or see this region's nucleotide sequence