Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12145 and BWI76_RS12150 are separated by 550 nucleotides BWI76_RS12150 and BWI76_RS12155 are separated by 78 nucleotides BWI76_RS12155 and BWI76_RS12160 are separated by 57 nucleotides BWI76_RS12160 and BWI76_RS12165 overlap by 1 nucleotides BWI76_RS12165 and BWI76_RS12170 are separated by 2 nucleotides
BWI76_RS12145: BWI76_RS12145 - hypothetical protein, at 2,546,659 to 2,547,765
_RS12145
BWI76_RS12150: BWI76_RS12150 - DNA damage-inducible protein I, at 2,548,316 to 2,548,549
_RS12150
BWI76_RS12155: BWI76_RS12155 - hypothetical protein, at 2,548,628 to 2,548,849
_RS12155
BWI76_RS12160: BWI76_RS12160 - hypothetical protein, at 2,548,907 to 2,549,506
_RS12160
BWI76_RS12165: BWI76_RS12165 - hypothetical protein, at 2,549,506 to 2,549,712
_RS12165
BWI76_RS12170: BWI76_RS12170 - hypothetical protein, at 2,549,715 to 2,550,011
_RS12170
Position (kb)
2548
2549 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2547.788 kb on + strand at 2547.875 kb on + strand at 2547.879 kb on + strand at 2547.883 kb on + strand at 2547.884 kb on + strand at 2547.902 kb on - strand at 2547.909 kb on + strand at 2547.909 kb on + strand at 2547.909 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.920 kb on + strand at 2547.928 kb on - strand at 2547.928 kb on - strand at 2547.928 kb on - strand at 2547.928 kb on - strand at 2547.928 kb on - strand at 2547.928 kb on - strand at 2547.944 kb on + strand at 2547.959 kb on - strand at 2547.963 kb on - strand at 2547.969 kb on + strand at 2547.972 kb on + strand at 2547.977 kb on + strand at 2547.977 kb on + strand at 2547.977 kb on + strand at 2547.977 kb on + strand at 2547.977 kb on + strand at 2547.980 kb on - strand at 2547.985 kb on - strand at 2547.985 kb on - strand at 2547.990 kb on + strand at 2548.004 kb on - strand at 2548.004 kb on - strand at 2548.145 kb on + strand at 2548.145 kb on + strand at 2548.153 kb on - strand at 2548.306 kb on + strand at 2548.362 kb on + strand, within BWI76_RS12150 at 2548.373 kb on + strand, within BWI76_RS12150 at 2548.456 kb on + strand, within BWI76_RS12150 at 2548.457 kb on - strand, within BWI76_RS12150 at 2548.464 kb on - strand, within BWI76_RS12150 at 2548.471 kb on - strand, within BWI76_RS12150 at 2548.587 kb on + strand at 2548.608 kb on - strand at 2548.687 kb on - strand, within BWI76_RS12155 at 2548.687 kb on - strand, within BWI76_RS12155 at 2548.801 kb on + strand, within BWI76_RS12155 at 2548.801 kb on + strand, within BWI76_RS12155 at 2548.878 kb on + strand at 2548.890 kb on + strand at 2548.898 kb on + strand at 2548.925 kb on - strand at 2548.934 kb on - strand at 2548.944 kb on - strand at 2548.956 kb on + strand at 2548.969 kb on - strand, within BWI76_RS12160 at 2548.969 kb on - strand, within BWI76_RS12160 at 2548.970 kb on - strand, within BWI76_RS12160 at 2549.023 kb on + strand, within BWI76_RS12160 at 2549.023 kb on + strand, within BWI76_RS12160 at 2549.023 kb on + strand, within BWI76_RS12160 at 2549.031 kb on - strand, within BWI76_RS12160 at 2549.133 kb on + strand, within BWI76_RS12160 at 2549.134 kb on + strand, within BWI76_RS12160 at 2549.313 kb on - strand, within BWI76_RS12160 at 2549.452 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 2,547,788 + -0.9 2,547,875 + +0.5 2,547,879 + -0.3 2,547,883 + +0.3 2,547,884 + +2.2 2,547,902 - -1.1 2,547,909 + +0.9 2,547,909 + +0.0 2,547,909 + -1.5 2,547,920 + -0.7 2,547,920 + +0.2 2,547,920 + -0.4 2,547,920 + +0.0 2,547,920 + +0.8 2,547,920 + -0.2 2,547,920 + -1.2 2,547,920 + -0.5 2,547,920 + +1.8 2,547,920 + +1.3 2,547,920 + +0.4 2,547,920 + -0.1 2,547,920 + +0.5 2,547,920 + -1.1 2,547,920 + -1.8 2,547,928 - -0.1 2,547,928 - -1.4 2,547,928 - -0.7 2,547,928 - +0.3 2,547,928 - +0.1 2,547,928 - -2.2 2,547,944 + -0.3 2,547,959 - +1.2 2,547,963 - +1.1 2,547,969 + -0.3 2,547,972 + -0.8 2,547,977 + -3.4 2,547,977 + +1.0 2,547,977 + -0.1 2,547,977 + +0.0 2,547,977 + +0.4 2,547,980 - -1.1 2,547,985 - -0.5 2,547,985 - +1.6 2,547,990 + -0.3 2,548,004 - -0.5 2,548,004 - +0.0 2,548,145 + +0.0 2,548,145 + +0.1 2,548,153 - -3.4 2,548,306 + +0.5 2,548,362 + BWI76_RS12150 0.20 +0.7 2,548,373 + BWI76_RS12150 0.24 -2.6 2,548,456 + BWI76_RS12150 0.60 +0.3 2,548,457 - BWI76_RS12150 0.60 -1.5 2,548,464 - BWI76_RS12150 0.63 +1.1 2,548,471 - BWI76_RS12150 0.66 -1.2 2,548,587 + -1.0 2,548,608 - +0.3 2,548,687 - BWI76_RS12155 0.27 +1.9 2,548,687 - BWI76_RS12155 0.27 -0.8 2,548,801 + BWI76_RS12155 0.78 -1.3 2,548,801 + BWI76_RS12155 0.78 -0.6 2,548,878 + +0.6 2,548,890 + -1.2 2,548,898 + +0.8 2,548,925 - +0.2 2,548,934 - +0.4 2,548,944 - +0.0 2,548,956 + -0.7 2,548,969 - BWI76_RS12160 0.10 +0.7 2,548,969 - BWI76_RS12160 0.10 -0.0 2,548,970 - BWI76_RS12160 0.10 +0.2 2,549,023 + BWI76_RS12160 0.19 -0.7 2,549,023 + BWI76_RS12160 0.19 -0.2 2,549,023 + BWI76_RS12160 0.19 +0.8 2,549,031 - BWI76_RS12160 0.21 -1.8 2,549,133 + BWI76_RS12160 0.38 -0.7 2,549,134 + BWI76_RS12160 0.38 -2.0 2,549,313 - BWI76_RS12160 0.68 +0.1 2,549,452 - +0.3
Or see this region's nucleotide sequence