Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11580

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11570 and BWI76_RS11575 are separated by 130 nucleotidesBWI76_RS11575 and BWI76_RS11580 are separated by 10 nucleotidesBWI76_RS11580 and BWI76_RS11585 are separated by 94 nucleotides BWI76_RS11570: BWI76_RS11570 - MFS transporter, at 2,434,019 to 2,435,374 _RS11570 BWI76_RS11575: BWI76_RS11575 - nicotinamidase/pyrazinamidase, at 2,435,505 to 2,436,146 _RS11575 BWI76_RS11580: BWI76_RS11580 - L-asparaginase 1, at 2,436,157 to 2,437,173 _RS11580 BWI76_RS11585: BWI76_RS11585 - signal peptide peptidase A, at 2,437,268 to 2,439,121 _RS11585 Position (kb) 2436 2437 2438Strain fitness (log2 ratio) -1 0 1 2at 2435.714 kb on + strand, within BWI76_RS11575at 2435.877 kb on + strand, within BWI76_RS11575at 2435.917 kb on - strandat 2435.947 kb on + strand, within BWI76_RS11575at 2435.955 kb on - strand, within BWI76_RS11575at 2436.064 kb on + strand, within BWI76_RS11575at 2436.071 kb on - strand, within BWI76_RS11575at 2436.375 kb on + strand, within BWI76_RS11580at 2436.931 kb on - strand, within BWI76_RS11580at 2437.185 kb on + strandat 2437.206 kb on + strandat 2437.206 kb on + strandat 2437.206 kb on + strandat 2437.209 kb on - strandat 2437.214 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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2,435,714 + BWI76_RS11575 0.33 -0.0
2,435,877 + BWI76_RS11575 0.58 +0.1
2,435,917 - +0.4
2,435,947 + BWI76_RS11575 0.69 +0.5
2,435,955 - BWI76_RS11575 0.70 +0.6
2,436,064 + BWI76_RS11575 0.87 +0.1
2,436,071 - BWI76_RS11575 0.88 +0.4
2,436,375 + BWI76_RS11580 0.21 -0.9
2,436,931 - BWI76_RS11580 0.76 -1.5
2,437,185 + -0.2
2,437,206 + +1.0
2,437,206 + -0.6
2,437,206 + +0.1
2,437,209 - +0.5
2,437,214 - +2.0

Or see this region's nucleotide sequence