Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11140 and BWI76_RS11145 overlap by 2 nucleotides BWI76_RS11145 and BWI76_RS11150 are separated by 5 nucleotides BWI76_RS11150 and BWI76_RS11155 are separated by 12 nucleotides BWI76_RS11155 and BWI76_RS11160 overlap by 20 nucleotides BWI76_RS11160 and BWI76_RS11165 are separated by 19 nucleotides
BWI76_RS11140: BWI76_RS11140 - hypothetical protein, at 2,350,387 to 2,350,635
_RS11140
BWI76_RS11145: BWI76_RS11145 - histidine triad nucleotide-binding protein, at 2,350,634 to 2,350,990
_RS11145
BWI76_RS11150: BWI76_RS11150 - membrane protein, at 2,350,996 to 2,351,370
_RS11150
BWI76_RS11155: BWI76_RS11155 - penicillin-binding protein activator LpoB, at 2,351,383 to 2,352,018
_RS11155
BWI76_RS11160: BWI76_RS11160 - thiamine kinase, at 2,351,999 to 2,352,817
_RS11160
BWI76_RS11165: BWI76_RS11165 - beta-N-acetylhexosaminidase, at 2,352,837 to 2,353,859
_RS11165
Position (kb)
2351
2352
2353 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2351.192 kb on - strand, within BWI76_RS11150 at 2351.319 kb on - strand, within BWI76_RS11150 at 2351.400 kb on - strand at 2351.658 kb on - strand, within BWI76_RS11155 at 2351.881 kb on - strand, within BWI76_RS11155 at 2352.007 kb on - strand at 2352.066 kb on - strand at 2352.951 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 2,351,192 - BWI76_RS11150 0.52 +1.6 2,351,319 - BWI76_RS11150 0.86 +0.8 2,351,400 - +0.1 2,351,658 - BWI76_RS11155 0.43 -0.6 2,351,881 - BWI76_RS11155 0.78 -2.9 2,352,007 - -2.9 2,352,066 - +0.5 2,352,951 - +0.3
Or see this region's nucleotide sequence