Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10975 and BWI76_RS10980 are separated by 124 nucleotides BWI76_RS10980 and BWI76_RS10985 are separated by 285 nucleotides BWI76_RS10985 and BWI76_RS10990 are separated by 72 nucleotides BWI76_RS10990 and BWI76_RS10995 are separated by 122 nucleotides BWI76_RS10995 and BWI76_RS11000 are separated by 135 nucleotides
BWI76_RS10975: BWI76_RS10975 - N-methyltryptophan oxidase, at 2,316,229 to 2,317,347
_RS10975
BWI76_RS10980: BWI76_RS10980 - biofilm formation regulatory protein BssS, at 2,317,472 to 2,317,726
_RS10980
BWI76_RS10985: BWI76_RS10985 - DNA damage-inducible protein I, at 2,318,012 to 2,318,257
_RS10985
BWI76_RS10990: BWI76_RS10990 - dihydroorotase, at 2,318,330 to 2,319,376
_RS10990
BWI76_RS10995: BWI76_RS10995 - lipoprotein, at 2,319,499 to 2,320,059
_RS10995
BWI76_RS11000: BWI76_RS11000 - glutaredoxin 2, at 2,320,195 to 2,320,842
_RS11000
Position (kb)
2318
2319
2320 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2317.337 kb on - strand at 2317.344 kb on + strand at 2317.352 kb on + strand at 2317.361 kb on - strand at 2317.367 kb on - strand at 2317.433 kb on - strand at 2317.492 kb on - strand at 2317.497 kb on - strand at 2317.517 kb on - strand, within BWI76_RS10980 at 2317.518 kb on - strand, within BWI76_RS10980 at 2317.638 kb on + strand, within BWI76_RS10980 at 2317.643 kb on + strand, within BWI76_RS10980 at 2317.670 kb on + strand, within BWI76_RS10980 at 2317.676 kb on - strand, within BWI76_RS10980 at 2317.680 kb on + strand, within BWI76_RS10980 at 2317.690 kb on + strand, within BWI76_RS10980 at 2317.697 kb on + strand, within BWI76_RS10980 at 2317.697 kb on + strand, within BWI76_RS10980 at 2317.698 kb on - strand, within BWI76_RS10980 at 2317.705 kb on - strand at 2317.705 kb on - strand at 2317.726 kb on + strand at 2317.927 kb on + strand at 2317.935 kb on - strand at 2317.945 kb on - strand at 2318.025 kb on + strand at 2318.033 kb on - strand at 2318.033 kb on - strand at 2318.035 kb on - strand at 2318.045 kb on - strand, within BWI76_RS10985 at 2318.134 kb on + strand, within BWI76_RS10985 at 2318.152 kb on - strand, within BWI76_RS10985 at 2318.193 kb on - strand, within BWI76_RS10985 at 2318.193 kb on - strand, within BWI76_RS10985 at 2318.439 kb on + strand, within BWI76_RS10990 at 2318.567 kb on + strand at 2318.866 kb on - strand, within BWI76_RS10990 at 2319.099 kb on - strand, within BWI76_RS10990 at 2319.372 kb on + strand at 2319.431 kb on + strand at 2319.761 kb on + strand, within BWI76_RS10995 at 2319.769 kb on - strand, within BWI76_RS10995 at 2319.838 kb on - strand, within BWI76_RS10995 at 2319.947 kb on - strand, within BWI76_RS10995 at 2319.989 kb on + strand, within BWI76_RS10995 at 2320.007 kb on + strand at 2320.007 kb on - strand at 2320.020 kb on - strand at 2320.176 kb on + strand at 2320.363 kb on - strand at 2320.363 kb on - strand, within BWI76_RS11000
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 2,317,337 - -0.1 2,317,344 + +0.1 2,317,352 + -0.2 2,317,361 - -0.6 2,317,367 - -0.7 2,317,433 - +0.2 2,317,492 - +0.6 2,317,497 - -0.0 2,317,517 - BWI76_RS10980 0.18 +0.4 2,317,518 - BWI76_RS10980 0.18 -0.3 2,317,638 + BWI76_RS10980 0.65 +2.6 2,317,643 + BWI76_RS10980 0.67 -0.1 2,317,670 + BWI76_RS10980 0.78 +0.2 2,317,676 - BWI76_RS10980 0.80 -0.2 2,317,680 + BWI76_RS10980 0.82 +0.1 2,317,690 + BWI76_RS10980 0.85 -0.4 2,317,697 + BWI76_RS10980 0.88 -0.8 2,317,697 + BWI76_RS10980 0.88 -0.5 2,317,698 - BWI76_RS10980 0.89 -0.9 2,317,705 - -0.1 2,317,705 - -1.3 2,317,726 + +1.1 2,317,927 + +0.5 2,317,935 - +0.6 2,317,945 - -0.3 2,318,025 + -0.6 2,318,033 - +0.3 2,318,033 - -0.0 2,318,035 - +0.6 2,318,045 - BWI76_RS10985 0.13 +0.1 2,318,134 + BWI76_RS10985 0.50 -0.7 2,318,152 - BWI76_RS10985 0.57 -0.4 2,318,193 - BWI76_RS10985 0.74 -0.1 2,318,193 - BWI76_RS10985 0.74 -0.6 2,318,439 + BWI76_RS10990 0.10 -1.7 2,318,567 + -0.4 2,318,866 - BWI76_RS10990 0.51 -5.3 2,319,099 - BWI76_RS10990 0.73 -0.7 2,319,372 + -5.3 2,319,431 + -2.6 2,319,761 + BWI76_RS10995 0.47 +0.1 2,319,769 - BWI76_RS10995 0.48 -0.9 2,319,838 - BWI76_RS10995 0.60 +0.8 2,319,947 - BWI76_RS10995 0.80 -0.5 2,319,989 + BWI76_RS10995 0.87 +0.3 2,320,007 + -0.1 2,320,007 - -1.1 2,320,020 - +0.2 2,320,176 + +0.2 2,320,363 - +1.9 2,320,363 - BWI76_RS11000 0.26 +0.4
Or see this region's nucleotide sequence