Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10930 and BWI76_RS10935 overlap by 8 nucleotides BWI76_RS10935 and BWI76_RS10940 are separated by 66 nucleotides BWI76_RS10940 and BWI76_RS10945 are separated by 0 nucleotides BWI76_RS10945 and BWI76_RS10950 are separated by 79 nucleotides
BWI76_RS10930: BWI76_RS10930 - glucan biosynthesis protein G, at 2,307,601 to 2,309,154
_RS10930
BWI76_RS10935: BWI76_RS10935 - glucan biosynthesis glucosyltransferase H, at 2,309,147 to 2,311,675
_RS10935
BWI76_RS10940: BWI76_RS10940 - YceK/YidQ family lipoprotein, at 2,311,742 to 2,311,969
_RS10940
BWI76_RS10945: BWI76_RS10945 - SecY/SecA suppressor protein, at 2,311,970 to 2,312,356
_RS10945
BWI76_RS10950: BWI76_RS10950 - MFS transporter, at 2,312,436 to 2,313,686
_RS10950
Position (kb)
2309
2310
2311
2312 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2308.325 kb on - strand, within BWI76_RS10930 at 2308.504 kb on - strand, within BWI76_RS10930 at 2308.544 kb on + strand, within BWI76_RS10930 at 2308.633 kb on - strand, within BWI76_RS10930 at 2308.882 kb on + strand, within BWI76_RS10930 at 2309.377 kb on + strand at 2309.383 kb on - strand at 2309.655 kb on - strand, within BWI76_RS10935 at 2309.778 kb on - strand, within BWI76_RS10935 at 2309.847 kb on + strand, within BWI76_RS10935 at 2310.070 kb on - strand, within BWI76_RS10935 at 2310.385 kb on + strand, within BWI76_RS10935 at 2310.395 kb on - strand, within BWI76_RS10935 at 2310.924 kb on - strand, within BWI76_RS10935 at 2311.155 kb on - strand, within BWI76_RS10935 at 2312.304 kb on - strand, within BWI76_RS10945 at 2312.539 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 2,308,325 - BWI76_RS10930 0.47 +0.1 2,308,504 - BWI76_RS10930 0.58 -0.7 2,308,544 + BWI76_RS10930 0.61 +0.5 2,308,633 - BWI76_RS10930 0.66 +0.8 2,308,882 + BWI76_RS10930 0.82 -0.8 2,309,377 + +0.3 2,309,383 - -0.5 2,309,655 - BWI76_RS10935 0.20 -1.9 2,309,778 - BWI76_RS10935 0.25 -1.4 2,309,847 + BWI76_RS10935 0.28 -0.4 2,310,070 - BWI76_RS10935 0.36 +1.9 2,310,385 + BWI76_RS10935 0.49 -1.4 2,310,395 - BWI76_RS10935 0.49 -0.4 2,310,924 - BWI76_RS10935 0.70 -2.6 2,311,155 - BWI76_RS10935 0.79 -0.6 2,312,304 - BWI76_RS10945 0.86 +0.2 2,312,539 - +0.6
Or see this region's nucleotide sequence