Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10935

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS10930 and BWI76_RS10935 overlap by 8 nucleotidesBWI76_RS10935 and BWI76_RS10940 are separated by 66 nucleotidesBWI76_RS10940 and BWI76_RS10945 are separated by 0 nucleotidesBWI76_RS10945 and BWI76_RS10950 are separated by 79 nucleotides BWI76_RS10930: BWI76_RS10930 - glucan biosynthesis protein G, at 2,307,601 to 2,309,154 _RS10930 BWI76_RS10935: BWI76_RS10935 - glucan biosynthesis glucosyltransferase H, at 2,309,147 to 2,311,675 _RS10935 BWI76_RS10940: BWI76_RS10940 - YceK/YidQ family lipoprotein, at 2,311,742 to 2,311,969 _RS10940 BWI76_RS10945: BWI76_RS10945 - SecY/SecA suppressor protein, at 2,311,970 to 2,312,356 _RS10945 BWI76_RS10950: BWI76_RS10950 - MFS transporter, at 2,312,436 to 2,313,686 _RS10950 Position (kb) 2309 2310 2311 2312Strain fitness (log2 ratio) -2 -1 0 1 2at 2308.325 kb on - strand, within BWI76_RS10930at 2308.504 kb on - strand, within BWI76_RS10930at 2308.544 kb on + strand, within BWI76_RS10930at 2308.633 kb on - strand, within BWI76_RS10930at 2308.882 kb on + strand, within BWI76_RS10930at 2309.377 kb on + strandat 2309.383 kb on - strandat 2309.655 kb on - strand, within BWI76_RS10935at 2309.778 kb on - strand, within BWI76_RS10935at 2309.847 kb on + strand, within BWI76_RS10935at 2310.070 kb on - strand, within BWI76_RS10935at 2310.385 kb on + strand, within BWI76_RS10935at 2310.395 kb on - strand, within BWI76_RS10935at 2310.924 kb on - strand, within BWI76_RS10935at 2311.155 kb on - strand, within BWI76_RS10935at 2312.304 kb on - strand, within BWI76_RS10945at 2312.539 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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2,308,325 - BWI76_RS10930 0.47 +0.1
2,308,504 - BWI76_RS10930 0.58 -0.7
2,308,544 + BWI76_RS10930 0.61 +0.5
2,308,633 - BWI76_RS10930 0.66 +0.8
2,308,882 + BWI76_RS10930 0.82 -0.8
2,309,377 + +0.3
2,309,383 - -0.5
2,309,655 - BWI76_RS10935 0.20 -1.9
2,309,778 - BWI76_RS10935 0.25 -1.4
2,309,847 + BWI76_RS10935 0.28 -0.4
2,310,070 - BWI76_RS10935 0.36 +1.9
2,310,385 + BWI76_RS10935 0.49 -1.4
2,310,395 - BWI76_RS10935 0.49 -0.4
2,310,924 - BWI76_RS10935 0.70 -2.6
2,311,155 - BWI76_RS10935 0.79 -0.6
2,312,304 - BWI76_RS10945 0.86 +0.2
2,312,539 - +0.6

Or see this region's nucleotide sequence