Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09910

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09900 and BWI76_RS09905 are separated by 56 nucleotidesBWI76_RS09905 and BWI76_RS09910 are separated by 248 nucleotidesBWI76_RS09910 and BWI76_RS09915 are separated by 168 nucleotidesBWI76_RS09915 and BWI76_RS09920 overlap by 4 nucleotides BWI76_RS09900: BWI76_RS09900 - alkanesulfonate transporter permease subunit, at 2,082,557 to 2,083,348 _RS09900 BWI76_RS09905: BWI76_RS09905 - FMN reductase (NADPH), at 2,083,405 to 2,083,980 _RS09905 BWI76_RS09910: BWI76_RS09910 - dihydroorotate dehydrogenase (quinone), at 2,084,229 to 2,085,239 _RS09910 BWI76_RS09915: BWI76_RS09915 - cell division protein ZapC, at 2,085,408 to 2,085,950 _RS09915 BWI76_RS09920: BWI76_RS09920 - hypothetical protein, at 2,085,947 to 2,087,056 _RS09920 Position (kb) 2084 2085 2086Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2at 2083.381 kb on + strandat 2083.462 kb on + strandat 2083.470 kb on - strand, within BWI76_RS09905at 2083.614 kb on + strand, within BWI76_RS09905at 2083.622 kb on + strand, within BWI76_RS09905at 2083.711 kb on + strand, within BWI76_RS09905at 2083.830 kb on - strand, within BWI76_RS09905at 2083.951 kb on - strandat 2083.951 kb on - strandat 2084.097 kb on + strandat 2084.344 kb on + strand, within BWI76_RS09910at 2084.382 kb on - strand, within BWI76_RS09910at 2084.398 kb on + strand, within BWI76_RS09910at 2084.445 kb on - strand, within BWI76_RS09910at 2084.504 kb on + strand, within BWI76_RS09910at 2084.518 kb on + strand, within BWI76_RS09910at 2084.527 kb on + strand, within BWI76_RS09910at 2084.527 kb on + strand, within BWI76_RS09910at 2084.550 kb on - strand, within BWI76_RS09910at 2084.579 kb on + strand, within BWI76_RS09910at 2084.579 kb on + strand, within BWI76_RS09910at 2084.579 kb on + strand, within BWI76_RS09910at 2084.586 kb on + strand, within BWI76_RS09910at 2084.586 kb on + strand, within BWI76_RS09910at 2084.592 kb on - strand, within BWI76_RS09910at 2084.594 kb on - strand, within BWI76_RS09910at 2084.597 kb on - strand, within BWI76_RS09910at 2084.615 kb on + strand, within BWI76_RS09910at 2084.654 kb on + strand, within BWI76_RS09910at 2084.662 kb on - strand, within BWI76_RS09910at 2084.662 kb on - strand, within BWI76_RS09910at 2084.686 kb on - strand, within BWI76_RS09910at 2084.760 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.761 kb on + strand, within BWI76_RS09910at 2084.768 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.769 kb on - strand, within BWI76_RS09910at 2084.884 kb on + strand, within BWI76_RS09910at 2084.892 kb on - strand, within BWI76_RS09910at 2084.909 kb on + strand, within BWI76_RS09910at 2084.926 kb on + strand, within BWI76_RS09910at 2084.934 kb on - strand, within BWI76_RS09910at 2084.978 kb on - strand, within BWI76_RS09910at 2084.987 kb on + strand, within BWI76_RS09910at 2084.987 kb on + strand, within BWI76_RS09910at 2084.993 kb on + strand, within BWI76_RS09910at 2084.995 kb on + strand, within BWI76_RS09910at 2084.995 kb on - strand, within BWI76_RS09910at 2085.017 kb on - strand, within BWI76_RS09910at 2085.023 kb on + strand, within BWI76_RS09910at 2085.033 kb on + strand, within BWI76_RS09910at 2085.033 kb on + strand, within BWI76_RS09910at 2085.036 kb on - strand, within BWI76_RS09910at 2085.044 kb on + strand, within BWI76_RS09910at 2085.044 kb on + strand, within BWI76_RS09910at 2085.044 kb on + strand, within BWI76_RS09910at 2085.044 kb on + strand, within BWI76_RS09910at 2085.044 kb on + strand, within BWI76_RS09910at 2085.052 kb on - strand, within BWI76_RS09910at 2085.118 kb on + strand, within BWI76_RS09910at 2085.126 kb on - strand, within BWI76_RS09910at 2085.131 kb on - strandat 2085.151 kb on - strandat 2085.155 kb on + strandat 2085.160 kb on + strandat 2085.168 kb on - strandat 2085.168 kb on - strandat 2085.168 kb on - strandat 2085.171 kb on + strandat 2085.233 kb on + strandat 2085.233 kb on + strandat 2085.241 kb on - strandat 2085.359 kb on - strandat 2085.361 kb on - strandat 2085.397 kb on - strandat 2085.413 kb on + strandat 2085.421 kb on - strandat 2085.441 kb on - strandat 2085.453 kb on + strandat 2085.453 kb on + strandat 2085.453 kb on + strandat 2085.461 kb on - strandat 2085.512 kb on - strand, within BWI76_RS09915at 2085.528 kb on + strand, within BWI76_RS09915at 2085.570 kb on + strand, within BWI76_RS09915at 2085.612 kb on - strand, within BWI76_RS09915at 2085.698 kb on + strand, within BWI76_RS09915at 2085.698 kb on + strand, within BWI76_RS09915at 2085.698 kb on + strand, within BWI76_RS09915at 2085.706 kb on - strand, within BWI76_RS09915at 2085.706 kb on - strand, within BWI76_RS09915at 2085.706 kb on - strand, within BWI76_RS09915at 2085.908 kb on - strandat 2085.989 kb on + strandat 2085.994 kb on + strandat 2085.994 kb on + strandat 2085.997 kb on - strandat 2086.002 kb on - strandat 2086.099 kb on - strand, within BWI76_RS09920at 2086.201 kb on - strand, within BWI76_RS09920

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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2,083,381 + +1.6
2,083,462 + -0.0
2,083,470 - BWI76_RS09905 0.11 +0.4
2,083,614 + BWI76_RS09905 0.36 -0.1
2,083,622 + BWI76_RS09905 0.38 -0.6
2,083,711 + BWI76_RS09905 0.53 +0.9
2,083,830 - BWI76_RS09905 0.74 +0.4
2,083,951 - +0.2
2,083,951 - +0.9
2,084,097 + +0.3
2,084,344 + BWI76_RS09910 0.11 -5.2
2,084,382 - BWI76_RS09910 0.15 -1.9
2,084,398 + BWI76_RS09910 0.17 -3.3
2,084,445 - BWI76_RS09910 0.21 -1.8
2,084,504 + BWI76_RS09910 0.27 -4.9
2,084,518 + BWI76_RS09910 0.29 -2.6
2,084,527 + BWI76_RS09910 0.29 -3.7
2,084,527 + BWI76_RS09910 0.29 -2.0
2,084,550 - BWI76_RS09910 0.32 -3.9
2,084,579 + BWI76_RS09910 0.35 -4.5
2,084,579 + BWI76_RS09910 0.35 -3.3
2,084,579 + BWI76_RS09910 0.35 -4.3
2,084,586 + BWI76_RS09910 0.35 -4.6
2,084,586 + BWI76_RS09910 0.35 -5.1
2,084,592 - BWI76_RS09910 0.36 -2.1
2,084,594 - BWI76_RS09910 0.36 -0.6
2,084,597 - BWI76_RS09910 0.36 -3.0
2,084,615 + BWI76_RS09910 0.38 -5.4
2,084,654 + BWI76_RS09910 0.42 -4.8
2,084,662 - BWI76_RS09910 0.43 -3.6
2,084,662 - BWI76_RS09910 0.43 -1.5
2,084,686 - BWI76_RS09910 0.45 -2.5
2,084,760 + BWI76_RS09910 0.53 -3.8
2,084,761 + BWI76_RS09910 0.53 -2.5
2,084,761 + BWI76_RS09910 0.53 -5.6
2,084,761 + BWI76_RS09910 0.53 -1.6
2,084,761 + BWI76_RS09910 0.53 -3.1
2,084,761 + BWI76_RS09910 0.53 -5.7
2,084,761 + BWI76_RS09910 0.53 -4.8
2,084,761 + BWI76_RS09910 0.53 -4.7
2,084,761 + BWI76_RS09910 0.53 -4.2
2,084,761 + BWI76_RS09910 0.53 -4.5
2,084,761 + BWI76_RS09910 0.53 -3.8
2,084,761 + BWI76_RS09910 0.53 -2.7
2,084,761 + BWI76_RS09910 0.53 -3.0
2,084,761 + BWI76_RS09910 0.53 -5.4
2,084,761 + BWI76_RS09910 0.53 -4.9
2,084,768 - BWI76_RS09910 0.53 -3.2
2,084,769 - BWI76_RS09910 0.53 -1.1
2,084,769 - BWI76_RS09910 0.53 -2.5
2,084,769 - BWI76_RS09910 0.53 -2.8
2,084,769 - BWI76_RS09910 0.53 -3.5
2,084,769 - BWI76_RS09910 0.53 -1.9
2,084,769 - BWI76_RS09910 0.53 -2.0
2,084,769 - BWI76_RS09910 0.53 -4.2
2,084,769 - BWI76_RS09910 0.53 +0.7
2,084,769 - BWI76_RS09910 0.53 -3.0
2,084,769 - BWI76_RS09910 0.53 -3.1
2,084,769 - BWI76_RS09910 0.53 -0.1
2,084,769 - BWI76_RS09910 0.53 -2.9
2,084,769 - BWI76_RS09910 0.53 -4.3
2,084,769 - BWI76_RS09910 0.53 -1.5
2,084,884 + BWI76_RS09910 0.65 -3.8
2,084,892 - BWI76_RS09910 0.66 -1.9
2,084,909 + BWI76_RS09910 0.67 -3.5
2,084,926 + BWI76_RS09910 0.69 -3.6
2,084,934 - BWI76_RS09910 0.70 -3.1
2,084,978 - BWI76_RS09910 0.74 -3.6
2,084,987 + BWI76_RS09910 0.75 -6.3
2,084,987 + BWI76_RS09910 0.75 -3.4
2,084,993 + BWI76_RS09910 0.76 -2.3
2,084,995 + BWI76_RS09910 0.76 -1.7
2,084,995 - BWI76_RS09910 0.76 -2.6
2,085,017 - BWI76_RS09910 0.78 -2.5
2,085,023 + BWI76_RS09910 0.79 -3.7
2,085,033 + BWI76_RS09910 0.80 -4.4
2,085,033 + BWI76_RS09910 0.80 -3.1
2,085,036 - BWI76_RS09910 0.80 -2.9
2,085,044 + BWI76_RS09910 0.81 -4.4
2,085,044 + BWI76_RS09910 0.81 -5.3
2,085,044 + BWI76_RS09910 0.81 -5.0
2,085,044 + BWI76_RS09910 0.81 -3.3
2,085,044 + BWI76_RS09910 0.81 -6.1
2,085,052 - BWI76_RS09910 0.81 -4.1
2,085,118 + BWI76_RS09910 0.88 -4.5
2,085,126 - BWI76_RS09910 0.89 -2.0
2,085,131 - -0.4
2,085,151 - -4.2
2,085,155 + -3.6
2,085,160 + -2.1
2,085,168 - -2.2
2,085,168 - -1.5
2,085,168 - -2.3
2,085,171 + -3.2
2,085,233 + +1.5
2,085,233 + +0.5
2,085,241 - +0.3
2,085,359 - -1.7
2,085,361 - -1.2
2,085,397 - +0.2
2,085,413 + -0.3
2,085,421 - -1.1
2,085,441 - -1.1
2,085,453 + -0.1
2,085,453 + +0.2
2,085,453 + -1.2
2,085,461 - -0.8
2,085,512 - BWI76_RS09915 0.19 -1.3
2,085,528 + BWI76_RS09915 0.22 -0.6
2,085,570 + BWI76_RS09915 0.30 +0.6
2,085,612 - BWI76_RS09915 0.38 +0.4
2,085,698 + BWI76_RS09915 0.53 +0.1
2,085,698 + BWI76_RS09915 0.53 +0.2
2,085,698 + BWI76_RS09915 0.53 -0.1
2,085,706 - BWI76_RS09915 0.55 +1.8
2,085,706 - BWI76_RS09915 0.55 +0.5
2,085,706 - BWI76_RS09915 0.55 -0.7
2,085,908 - +0.1
2,085,989 + -0.0
2,085,994 + -2.6
2,085,994 + -1.3
2,085,997 - +0.4
2,086,002 - -1.7
2,086,099 - BWI76_RS09920 0.14 -0.1
2,086,201 - BWI76_RS09920 0.23 +0.4

Or see this region's nucleotide sequence