Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08530 and BWI76_RS08535 are separated by 128 nucleotides BWI76_RS08535 and BWI76_RS08540 are separated by 34 nucleotides BWI76_RS08540 and BWI76_RS08545 are separated by 9 nucleotides
BWI76_RS08530: BWI76_RS08530 - protein TolA, at 1,805,018 to 1,806,355
_RS08530
BWI76_RS08535: BWI76_RS08535 - translocation protein TolB, at 1,806,484 to 1,807,776
_RS08535
BWI76_RS08540: BWI76_RS08540 - hypothetical protein, at 1,807,811 to 1,808,335
_RS08540
BWI76_RS08545: BWI76_RS08545 - cell division protein CpoB, at 1,808,345 to 1,809,130
_RS08545
Position (kb) 1806
1807
1808 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1806.168 kb on - strand, within BWI76_RS08530 at 1806.468 kb on + strand at 1806.476 kb on - strand at 1806.619 kb on + strand, within BWI76_RS08535 at 1806.763 kb on - strand at 1807.007 kb on - strand, within BWI76_RS08535 at 1807.291 kb on - strand, within BWI76_RS08535 at 1807.741 kb on - strand at 1807.756 kb on + strand at 1808.154 kb on - strand, within BWI76_RS08540 at 1808.166 kb on + strand, within BWI76_RS08540
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 1,806,168 - BWI76_RS08530 0.86 -0.5 1,806,468 + -0.1 1,806,476 - -0.4 1,806,619 + BWI76_RS08535 0.10 -2.4 1,806,763 - +0.0 1,807,007 - BWI76_RS08535 0.40 -2.6 1,807,291 - BWI76_RS08535 0.62 -1.4 1,807,741 - -1.1 1,807,756 + +0.0 1,808,154 - BWI76_RS08540 0.65 -3.0 1,808,166 + BWI76_RS08540 0.68 -1.7
Or see this region's nucleotide sequence