Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08180

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08145 and BWI76_RS08150 are separated by 97 nucleotidesBWI76_RS08150 and BWI76_RS08155 are separated by 45 nucleotidesBWI76_RS08155 and BWI76_RS08160 are separated by 21 nucleotidesBWI76_RS08160 and BWI76_RS08165 are separated by 34 nucleotidesBWI76_RS08165 and BWI76_RS08170 are separated by 35 nucleotidesBWI76_RS08170 and BWI76_RS08175 are separated by 8 nucleotidesBWI76_RS08175 and BWI76_RS08180 are separated by 229 nucleotidesBWI76_RS08180 and BWI76_RS08185 are separated by 328 nucleotides BWI76_RS08145: BWI76_RS08145 - tRNA-Gln, at 1,727,048 to 1,727,122 _RS08145 BWI76_RS08150: BWI76_RS08150 - tRNA-Gln, at 1,727,220 to 1,727,294 _RS08150 BWI76_RS08155: BWI76_RS08155 - tRNA-Met, at 1,727,340 to 1,727,416 _RS08155 BWI76_RS08160: BWI76_RS08160 - tRNA-Gln, at 1,727,438 to 1,727,512 _RS08160 BWI76_RS08165: BWI76_RS08165 - tRNA-Gln, at 1,727,547 to 1,727,621 _RS08165 BWI76_RS08170: BWI76_RS08170 - tRNA-Leu, at 1,727,657 to 1,727,741 _RS08170 BWI76_RS08175: BWI76_RS08175 - tRNA-Met, at 1,727,750 to 1,727,826 _RS08175 BWI76_RS08180: BWI76_RS08180 - asparagine synthase B, at 1,728,056 to 1,729,717 _RS08180 BWI76_RS08185: BWI76_RS08185 - hypothetical protein, at 1,730,046 to 1,730,750 _RS08185 Position (kb) 1728 1729 1730Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1728.054 kb on + strandat 1728.224 kb on + strand, within BWI76_RS08180at 1728.453 kb on + strand, within BWI76_RS08180at 1728.453 kb on + strand, within BWI76_RS08180at 1728.461 kb on - strand, within BWI76_RS08180at 1728.658 kb on - strand, within BWI76_RS08180at 1729.004 kb on - strand, within BWI76_RS08180at 1729.026 kb on + strand, within BWI76_RS08180at 1729.114 kb on - strand, within BWI76_RS08180at 1729.141 kb on + strand, within BWI76_RS08180at 1729.245 kb on + strand, within BWI76_RS08180at 1729.334 kb on + strand, within BWI76_RS08180at 1729.334 kb on + strand, within BWI76_RS08180at 1729.334 kb on + strand, within BWI76_RS08180at 1729.342 kb on - strand, within BWI76_RS08180at 1729.402 kb on + strand, within BWI76_RS08180at 1729.594 kb on - strandat 1729.606 kb on + strandat 1729.726 kb on + strandat 1729.736 kb on + strandat 1729.756 kb on + strandat 1729.756 kb on + strandat 1729.759 kb on - strandat 1729.775 kb on + strandat 1730.033 kb on + strandat 1730.041 kb on - strandat 1730.041 kb on - strandat 1730.041 kb on - strandat 1730.058 kb on + strandat 1730.079 kb on + strandat 1730.094 kb on - strandat 1730.100 kb on + strandat 1730.109 kb on - strandat 1730.111 kb on + strandat 1730.120 kb on + strand, within BWI76_RS08185at 1730.122 kb on + strand, within BWI76_RS08185at 1730.130 kb on - strand, within BWI76_RS08185at 1730.132 kb on - strand, within BWI76_RS08185at 1730.142 kb on - strand, within BWI76_RS08185at 1730.160 kb on - strandat 1730.168 kb on + strand, within BWI76_RS08185at 1730.168 kb on + strand, within BWI76_RS08185at 1730.176 kb on - strand, within BWI76_RS08185at 1730.176 kb on - strand, within BWI76_RS08185at 1730.181 kb on + strand, within BWI76_RS08185at 1730.182 kb on - strand, within BWI76_RS08185at 1730.184 kb on - strand, within BWI76_RS08185at 1730.189 kb on - strand, within BWI76_RS08185at 1730.194 kb on - strand, within BWI76_RS08185at 1730.196 kb on - strand, within BWI76_RS08185at 1730.196 kb on - strand, within BWI76_RS08185at 1730.212 kb on + strand, within BWI76_RS08185at 1730.220 kb on - strand, within BWI76_RS08185at 1730.238 kb on + strand, within BWI76_RS08185at 1730.238 kb on + strand, within BWI76_RS08185at 1730.238 kb on + strand, within BWI76_RS08185at 1730.238 kb on + strand, within BWI76_RS08185at 1730.239 kb on - strand, within BWI76_RS08185at 1730.239 kb on - strand, within BWI76_RS08185at 1730.239 kb on - strand, within BWI76_RS08185at 1730.244 kb on - strand, within BWI76_RS08185at 1730.246 kb on - strand, within BWI76_RS08185at 1730.246 kb on - strand, within BWI76_RS08185at 1730.246 kb on - strand, within BWI76_RS08185at 1730.246 kb on - strand, within BWI76_RS08185at 1730.246 kb on - strand, within BWI76_RS08185at 1730.246 kb on - strand, within BWI76_RS08185at 1730.246 kb on - strand, within BWI76_RS08185at 1730.246 kb on - strand, within BWI76_RS08185at 1730.246 kb on - strand, within BWI76_RS08185at 1730.251 kb on - strand, within BWI76_RS08185at 1730.253 kb on + strand, within BWI76_RS08185at 1730.261 kb on - strand, within BWI76_RS08185at 1730.267 kb on + strand, within BWI76_RS08185at 1730.268 kb on + strand, within BWI76_RS08185at 1730.268 kb on + strand, within BWI76_RS08185at 1730.268 kb on + strand, within BWI76_RS08185at 1730.275 kb on - strand, within BWI76_RS08185at 1730.276 kb on - strand, within BWI76_RS08185at 1730.276 kb on - strand, within BWI76_RS08185at 1730.276 kb on - strand, within BWI76_RS08185at 1730.278 kb on + strand, within BWI76_RS08185at 1730.278 kb on + strand, within BWI76_RS08185at 1730.278 kb on + strand, within BWI76_RS08185at 1730.278 kb on + strand, within BWI76_RS08185at 1730.278 kb on + strand, within BWI76_RS08185at 1730.278 kb on + strand, within BWI76_RS08185at 1730.285 kb on + strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.286 kb on - strand, within BWI76_RS08185at 1730.293 kb on - strand, within BWI76_RS08185at 1730.314 kb on - strand, within BWI76_RS08185at 1730.365 kb on + strand, within BWI76_RS08185at 1730.383 kb on - strand, within BWI76_RS08185at 1730.383 kb on - strand, within BWI76_RS08185at 1730.383 kb on - strand, within BWI76_RS08185at 1730.401 kb on - strand, within BWI76_RS08185at 1730.413 kb on - strand, within BWI76_RS08185at 1730.413 kb on - strand, within BWI76_RS08185at 1730.413 kb on - strand, within BWI76_RS08185at 1730.413 kb on - strand, within BWI76_RS08185at 1730.413 kb on - strand, within BWI76_RS08185at 1730.423 kb on - strand, within BWI76_RS08185at 1730.548 kb on - strandat 1730.560 kb on - strand, within BWI76_RS08185at 1730.576 kb on + strand, within BWI76_RS08185at 1730.640 kb on + strandat 1730.646 kb on - strand, within BWI76_RS08185at 1730.648 kb on - strand, within BWI76_RS08185at 1730.648 kb on - strand, within BWI76_RS08185at 1730.648 kb on - strand, within BWI76_RS08185at 1730.648 kb on - strand, within BWI76_RS08185at 1730.648 kb on - strand, within BWI76_RS08185at 1730.648 kb on - strand, within BWI76_RS08185at 1730.648 kb on - strand, within BWI76_RS08185at 1730.648 kb on - strand, within BWI76_RS08185at 1730.648 kb on - strand, within BWI76_RS08185at 1730.698 kb on - strandat 1730.708 kb on - strandat 1730.709 kb on + strandat 1730.715 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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1,728,054 + +0.0
1,728,224 + BWI76_RS08180 0.10 +0.2
1,728,453 + BWI76_RS08180 0.24 -4.4
1,728,453 + BWI76_RS08180 0.24 -3.7
1,728,461 - BWI76_RS08180 0.24 -0.5
1,728,658 - BWI76_RS08180 0.36 -3.6
1,729,004 - BWI76_RS08180 0.57 -3.0
1,729,026 + BWI76_RS08180 0.58 -2.6
1,729,114 - BWI76_RS08180 0.64 -4.4
1,729,141 + BWI76_RS08180 0.65 -2.5
1,729,245 + BWI76_RS08180 0.72 -2.7
1,729,334 + BWI76_RS08180 0.77 -1.5
1,729,334 + BWI76_RS08180 0.77 -3.5
1,729,334 + BWI76_RS08180 0.77 -4.6
1,729,342 - BWI76_RS08180 0.77 -3.6
1,729,402 + BWI76_RS08180 0.81 -3.7
1,729,594 - -3.6
1,729,606 + -3.1
1,729,726 + -3.0
1,729,736 + -4.3
1,729,756 + -4.5
1,729,756 + -2.1
1,729,759 - -1.5
1,729,775 + -2.5
1,730,033 + +0.3
1,730,041 - -0.1
1,730,041 - +0.2
1,730,041 - +0.0
1,730,058 + +1.7
1,730,079 + -0.2
1,730,094 - -0.2
1,730,100 + -3.3
1,730,109 - -1.3
1,730,111 + +0.5
1,730,120 + BWI76_RS08185 0.10 +0.6
1,730,122 + BWI76_RS08185 0.11 -1.4
1,730,130 - BWI76_RS08185 0.12 +1.1
1,730,132 - BWI76_RS08185 0.12 +0.4
1,730,142 - BWI76_RS08185 0.14 +0.2
1,730,160 - +2.0
1,730,168 + BWI76_RS08185 0.17 -0.5
1,730,168 + BWI76_RS08185 0.17 +0.8
1,730,176 - BWI76_RS08185 0.18 -0.8
1,730,176 - BWI76_RS08185 0.18 +1.4
1,730,181 + BWI76_RS08185 0.19 +0.2
1,730,182 - BWI76_RS08185 0.19 +1.8
1,730,184 - BWI76_RS08185 0.20 -0.2
1,730,189 - BWI76_RS08185 0.20 +1.1
1,730,194 - BWI76_RS08185 0.21 -0.5
1,730,196 - BWI76_RS08185 0.21 -0.1
1,730,196 - BWI76_RS08185 0.21 +0.1
1,730,212 + BWI76_RS08185 0.24 -0.5
1,730,220 - BWI76_RS08185 0.25 +0.8
1,730,238 + BWI76_RS08185 0.27 -0.6
1,730,238 + BWI76_RS08185 0.27 +0.3
1,730,238 + BWI76_RS08185 0.27 -1.0
1,730,238 + BWI76_RS08185 0.27 -0.7
1,730,239 - BWI76_RS08185 0.27 +0.2
1,730,239 - BWI76_RS08185 0.27 -0.2
1,730,239 - BWI76_RS08185 0.27 +0.1
1,730,244 - BWI76_RS08185 0.28 +0.5
1,730,246 - BWI76_RS08185 0.28 +0.7
1,730,246 - BWI76_RS08185 0.28 +0.5
1,730,246 - BWI76_RS08185 0.28 -0.5
1,730,246 - BWI76_RS08185 0.28 +0.2
1,730,246 - BWI76_RS08185 0.28 +0.1
1,730,246 - BWI76_RS08185 0.28 +0.2
1,730,246 - BWI76_RS08185 0.28 +0.4
1,730,246 - BWI76_RS08185 0.28 -1.0
1,730,246 - BWI76_RS08185 0.28 +0.5
1,730,251 - BWI76_RS08185 0.29 +0.4
1,730,253 + BWI76_RS08185 0.29 +0.6
1,730,261 - BWI76_RS08185 0.30 +0.2
1,730,267 + BWI76_RS08185 0.31 -2.8
1,730,268 + BWI76_RS08185 0.31 +0.2
1,730,268 + BWI76_RS08185 0.31 +0.7
1,730,268 + BWI76_RS08185 0.31 +0.7
1,730,275 - BWI76_RS08185 0.32 -0.7
1,730,276 - BWI76_RS08185 0.33 -0.5
1,730,276 - BWI76_RS08185 0.33 +0.6
1,730,276 - BWI76_RS08185 0.33 -1.0
1,730,278 + BWI76_RS08185 0.33 -1.7
1,730,278 + BWI76_RS08185 0.33 +0.0
1,730,278 + BWI76_RS08185 0.33 -1.0
1,730,278 + BWI76_RS08185 0.33 -0.2
1,730,278 + BWI76_RS08185 0.33 +0.1
1,730,278 + BWI76_RS08185 0.33 +0.4
1,730,285 + BWI76_RS08185 0.34 +2.8
1,730,286 - BWI76_RS08185 0.34 -2.2
1,730,286 - BWI76_RS08185 0.34 +0.4
1,730,286 - BWI76_RS08185 0.34 -1.0
1,730,286 - BWI76_RS08185 0.34 +0.1
1,730,286 - BWI76_RS08185 0.34 +0.1
1,730,286 - BWI76_RS08185 0.34 +0.0
1,730,286 - BWI76_RS08185 0.34 +0.7
1,730,286 - BWI76_RS08185 0.34 +0.1
1,730,286 - BWI76_RS08185 0.34 -0.3
1,730,286 - BWI76_RS08185 0.34 -3.0
1,730,286 - BWI76_RS08185 0.34 +1.5
1,730,286 - BWI76_RS08185 0.34 -0.1
1,730,286 - BWI76_RS08185 0.34 -0.2
1,730,286 - BWI76_RS08185 0.34 -0.5
1,730,286 - BWI76_RS08185 0.34 -1.1
1,730,286 - BWI76_RS08185 0.34 +0.6
1,730,286 - BWI76_RS08185 0.34 +0.3
1,730,293 - BWI76_RS08185 0.35 +2.6
1,730,314 - BWI76_RS08185 0.38 +0.2
1,730,365 + BWI76_RS08185 0.45 +0.5
1,730,383 - BWI76_RS08185 0.48 -0.3
1,730,383 - BWI76_RS08185 0.48 +1.0
1,730,383 - BWI76_RS08185 0.48 -0.0
1,730,401 - BWI76_RS08185 0.50 -1.1
1,730,413 - BWI76_RS08185 0.52 +0.7
1,730,413 - BWI76_RS08185 0.52 -1.4
1,730,413 - BWI76_RS08185 0.52 -0.5
1,730,413 - BWI76_RS08185 0.52 +0.8
1,730,413 - BWI76_RS08185 0.52 +0.6
1,730,423 - BWI76_RS08185 0.53 -0.4
1,730,548 - -1.0
1,730,560 - BWI76_RS08185 0.73 -0.5
1,730,576 + BWI76_RS08185 0.75 -1.0
1,730,640 + +2.8
1,730,646 - BWI76_RS08185 0.85 -0.5
1,730,648 - BWI76_RS08185 0.85 +0.7
1,730,648 - BWI76_RS08185 0.85 -1.9
1,730,648 - BWI76_RS08185 0.85 -1.0
1,730,648 - BWI76_RS08185 0.85 +0.8
1,730,648 - BWI76_RS08185 0.85 +0.6
1,730,648 - BWI76_RS08185 0.85 +2.2
1,730,648 - BWI76_RS08185 0.85 +0.1
1,730,648 - BWI76_RS08185 0.85 -0.8
1,730,648 - BWI76_RS08185 0.85 +1.7
1,730,698 - +1.6
1,730,708 - -1.3
1,730,709 + +1.0
1,730,715 + +1.3

Or see this region's nucleotide sequence