Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08095 and BWI76_RS08100 overlap by 1 nucleotides BWI76_RS08100 and BWI76_RS08105 overlap by 1 nucleotides BWI76_RS08105 and BWI76_RS08110 are separated by 163 nucleotides
BWI76_RS08095: BWI76_RS08095 - arginine ABC transporter ATP-binding protein, at 1,716,367 to 1,717,092
_RS08095
BWI76_RS08100: BWI76_RS08100 - glutamate/aspartate transporter permease GltK, at 1,717,092 to 1,717,766
_RS08100
BWI76_RS08105: BWI76_RS08105 - glutamate/aspartate ABC transporter permease GltJ, at 1,717,766 to 1,718,506
_RS08105
BWI76_RS08110: BWI76_RS08110 - glutamate/aspartate ABC transporter substrate-binding protein, at 1,718,670 to 1,719,581
_RS08110
Position (kb)
1717
1718
1719 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1716.779 kb on + strand, within BWI76_RS08095 at 1716.780 kb on - strand, within BWI76_RS08095 at 1716.787 kb on - strand, within BWI76_RS08095 at 1716.787 kb on - strand, within BWI76_RS08095 at 1716.787 kb on - strand, within BWI76_RS08095 at 1716.839 kb on - strand, within BWI76_RS08095 at 1716.927 kb on - strand, within BWI76_RS08095 at 1716.976 kb on + strand, within BWI76_RS08095 at 1717.097 kb on - strand at 1717.246 kb on + strand, within BWI76_RS08100 at 1717.357 kb on + strand, within BWI76_RS08100 at 1717.357 kb on + strand, within BWI76_RS08100 at 1717.365 kb on - strand, within BWI76_RS08100 at 1717.365 kb on - strand, within BWI76_RS08100 at 1717.386 kb on - strand, within BWI76_RS08100 at 1717.699 kb on + strand at 1717.856 kb on + strand, within BWI76_RS08105 at 1717.883 kb on + strand, within BWI76_RS08105 at 1717.906 kb on - strand, within BWI76_RS08105 at 1718.024 kb on - strand, within BWI76_RS08105 at 1718.034 kb on - strand, within BWI76_RS08105 at 1718.122 kb on + strand, within BWI76_RS08105 at 1718.210 kb on - strand, within BWI76_RS08105 at 1718.244 kb on - strand, within BWI76_RS08105 at 1718.333 kb on + strand, within BWI76_RS08105 at 1718.416 kb on + strand, within BWI76_RS08105 at 1718.703 kb on - strand at 1719.091 kb on - strand, within BWI76_RS08110 at 1719.115 kb on + strand, within BWI76_RS08110 at 1719.115 kb on + strand, within BWI76_RS08110 at 1719.377 kb on + strand, within BWI76_RS08110
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 1,716,779 + BWI76_RS08095 0.57 -1.5 1,716,780 - BWI76_RS08095 0.57 -2.7 1,716,787 - BWI76_RS08095 0.58 -3.1 1,716,787 - BWI76_RS08095 0.58 +0.7 1,716,787 - BWI76_RS08095 0.58 -3.8 1,716,839 - BWI76_RS08095 0.65 -1.1 1,716,927 - BWI76_RS08095 0.77 -4.3 1,716,976 + BWI76_RS08095 0.84 -3.0 1,717,097 - -3.0 1,717,246 + BWI76_RS08100 0.23 -1.7 1,717,357 + BWI76_RS08100 0.39 -3.5 1,717,357 + BWI76_RS08100 0.39 -3.6 1,717,365 - BWI76_RS08100 0.40 -2.9 1,717,365 - BWI76_RS08100 0.40 -2.0 1,717,386 - BWI76_RS08100 0.44 +0.2 1,717,699 + -2.1 1,717,856 + BWI76_RS08105 0.12 +0.1 1,717,883 + BWI76_RS08105 0.16 -2.2 1,717,906 - BWI76_RS08105 0.19 -2.8 1,718,024 - BWI76_RS08105 0.35 -3.1 1,718,034 - BWI76_RS08105 0.36 -0.5 1,718,122 + BWI76_RS08105 0.48 -1.4 1,718,210 - BWI76_RS08105 0.60 -2.8 1,718,244 - BWI76_RS08105 0.65 -3.3 1,718,333 + BWI76_RS08105 0.77 -1.6 1,718,416 + BWI76_RS08105 0.88 -2.1 1,718,703 - -3.3 1,719,091 - BWI76_RS08110 0.46 -1.3 1,719,115 + BWI76_RS08110 0.49 -1.8 1,719,115 + BWI76_RS08110 0.49 -4.3 1,719,377 + BWI76_RS08110 0.78 -1.8
Or see this region's nucleotide sequence