Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07590 and BWI76_RS07595 are separated by 581 nucleotides BWI76_RS07595 and BWI76_RS07600 are separated by 182 nucleotides
BWI76_RS07590: BWI76_RS07590 - glutamate ABC transporter ATP-binding protein, at 1,606,900 to 1,607,661
_RS07590
BWI76_RS07595: BWI76_RS07595 - putative oxidoreductase, at 1,608,243 to 1,609,007
_RS07595
BWI76_RS07600: BWI76_RS07600 - aspartate aminotransferase family protein, at 1,609,190 to 1,610,527
_RS07600
Position (kb)
1608
1609
1610 Strain fitness (log2 ratio)
-1
0
1 at 1607.365 kb on - strand, within BWI76_RS07590 at 1607.437 kb on - strand, within BWI76_RS07590 at 1607.671 kb on - strand at 1607.697 kb on + strand at 1607.788 kb on - strand at 1607.788 kb on - strand at 1607.813 kb on - strand at 1607.923 kb on - strand at 1607.930 kb on + strand at 1607.938 kb on - strand at 1608.157 kb on - strand at 1608.157 kb on - strand at 1608.249 kb on - strand at 1608.347 kb on - strand, within BWI76_RS07595 at 1608.352 kb on + strand, within BWI76_RS07595 at 1608.570 kb on - strand, within BWI76_RS07595 at 1608.873 kb on - strand, within BWI76_RS07595 at 1609.040 kb on + strand at 1609.215 kb on - strand at 1609.287 kb on + strand at 1609.588 kb on + strand, within BWI76_RS07600 at 1609.588 kb on + strand, within BWI76_RS07600 at 1609.588 kb on + strand, within BWI76_RS07600 at 1609.596 kb on - strand, within BWI76_RS07600 at 1609.779 kb on - strand, within BWI76_RS07600
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 1,607,365 - BWI76_RS07590 0.61 +0.4 1,607,437 - BWI76_RS07590 0.70 -0.1 1,607,671 - +0.2 1,607,697 + -1.0 1,607,788 - +0.2 1,607,788 - -0.5 1,607,813 - -1.1 1,607,923 - -0.6 1,607,930 + +0.1 1,607,938 - -0.3 1,608,157 - -0.1 1,608,157 - +0.5 1,608,249 - +0.7 1,608,347 - BWI76_RS07595 0.14 +0.1 1,608,352 + BWI76_RS07595 0.14 -1.4 1,608,570 - BWI76_RS07595 0.43 -1.3 1,608,873 - BWI76_RS07595 0.82 +0.5 1,609,040 + +1.5 1,609,215 - +0.5 1,609,287 + +0.3 1,609,588 + BWI76_RS07600 0.30 +0.8 1,609,588 + BWI76_RS07600 0.30 +0.5 1,609,588 + BWI76_RS07600 0.30 +0.4 1,609,596 - BWI76_RS07600 0.30 -0.4 1,609,779 - BWI76_RS07600 0.44 +0.2
Or see this region's nucleotide sequence