Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07595

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07590 and BWI76_RS07595 are separated by 581 nucleotidesBWI76_RS07595 and BWI76_RS07600 are separated by 182 nucleotides BWI76_RS07590: BWI76_RS07590 - glutamate ABC transporter ATP-binding protein, at 1,606,900 to 1,607,661 _RS07590 BWI76_RS07595: BWI76_RS07595 - putative oxidoreductase, at 1,608,243 to 1,609,007 _RS07595 BWI76_RS07600: BWI76_RS07600 - aspartate aminotransferase family protein, at 1,609,190 to 1,610,527 _RS07600 Position (kb) 1608 1609 1610Strain fitness (log2 ratio) -1 0 1at 1607.365 kb on - strand, within BWI76_RS07590at 1607.437 kb on - strand, within BWI76_RS07590at 1607.671 kb on - strandat 1607.697 kb on + strandat 1607.788 kb on - strandat 1607.788 kb on - strandat 1607.813 kb on - strandat 1607.923 kb on - strandat 1607.930 kb on + strandat 1607.938 kb on - strandat 1608.157 kb on - strandat 1608.157 kb on - strandat 1608.249 kb on - strandat 1608.347 kb on - strand, within BWI76_RS07595at 1608.352 kb on + strand, within BWI76_RS07595at 1608.570 kb on - strand, within BWI76_RS07595at 1608.873 kb on - strand, within BWI76_RS07595at 1609.040 kb on + strandat 1609.215 kb on - strandat 1609.287 kb on + strandat 1609.588 kb on + strand, within BWI76_RS07600at 1609.588 kb on + strand, within BWI76_RS07600at 1609.588 kb on + strand, within BWI76_RS07600at 1609.596 kb on - strand, within BWI76_RS07600at 1609.779 kb on - strand, within BWI76_RS07600

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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1,607,365 - BWI76_RS07590 0.61 +0.4
1,607,437 - BWI76_RS07590 0.70 -0.1
1,607,671 - +0.2
1,607,697 + -1.0
1,607,788 - +0.2
1,607,788 - -0.5
1,607,813 - -1.1
1,607,923 - -0.6
1,607,930 + +0.1
1,607,938 - -0.3
1,608,157 - -0.1
1,608,157 - +0.5
1,608,249 - +0.7
1,608,347 - BWI76_RS07595 0.14 +0.1
1,608,352 + BWI76_RS07595 0.14 -1.4
1,608,570 - BWI76_RS07595 0.43 -1.3
1,608,873 - BWI76_RS07595 0.82 +0.5
1,609,040 + +1.5
1,609,215 - +0.5
1,609,287 + +0.3
1,609,588 + BWI76_RS07600 0.30 +0.8
1,609,588 + BWI76_RS07600 0.30 +0.5
1,609,588 + BWI76_RS07600 0.30 +0.4
1,609,596 - BWI76_RS07600 0.30 -0.4
1,609,779 - BWI76_RS07600 0.44 +0.2

Or see this region's nucleotide sequence