Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07070

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07065 and BWI76_RS07070 overlap by 4 nucleotidesBWI76_RS07070 and BWI76_RS07075 are separated by 96 nucleotidesBWI76_RS07075 and BWI76_RS07080 are separated by 106 nucleotides BWI76_RS07065: BWI76_RS07065 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 1,486,550 to 1,487,617 _RS07065 BWI76_RS07070: BWI76_RS07070 - 5-(carboxyamino)imidazole ribonucleotide mutase, at 1,487,614 to 1,488,123 _RS07070 BWI76_RS07075: BWI76_RS07075 - hypothetical protein, at 1,488,220 to 1,488,549 _RS07075 BWI76_RS07080: BWI76_RS07080 - UDP-2,3-diacylglucosamine diphosphatase, at 1,488,656 to 1,489,378 _RS07080 Position (kb) 1487 1488 1489Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1486.753 kb on - strand, within BWI76_RS07065at 1486.967 kb on - strand, within BWI76_RS07065at 1487.019 kb on + strand, within BWI76_RS07065at 1487.154 kb on - strand, within BWI76_RS07065at 1487.222 kb on + strand, within BWI76_RS07065at 1487.293 kb on - strand, within BWI76_RS07065at 1487.293 kb on - strand, within BWI76_RS07065at 1487.639 kb on - strandat 1487.641 kb on + strandat 1487.694 kb on + strand, within BWI76_RS07070at 1487.835 kb on - strand, within BWI76_RS07070at 1487.847 kb on - strand, within BWI76_RS07070at 1487.901 kb on - strand, within BWI76_RS07070at 1487.962 kb on - strand, within BWI76_RS07070at 1488.071 kb on + strand, within BWI76_RS07070at 1488.148 kb on + strandat 1488.156 kb on - strandat 1488.158 kb on + strandat 1488.158 kb on + strandat 1488.344 kb on + strand, within BWI76_RS07075at 1488.344 kb on + strand, within BWI76_RS07075at 1488.375 kb on + strand, within BWI76_RS07075at 1488.435 kb on + strand, within BWI76_RS07075

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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1,486,753 - BWI76_RS07065 0.19 -3.6
1,486,967 - BWI76_RS07065 0.39 -2.6
1,487,019 + BWI76_RS07065 0.44 -2.0
1,487,154 - BWI76_RS07065 0.57 -1.7
1,487,222 + BWI76_RS07065 0.63 -3.4
1,487,293 - BWI76_RS07065 0.70 -4.6
1,487,293 - BWI76_RS07065 0.70 -3.2
1,487,639 - -2.1
1,487,641 + -3.5
1,487,694 + BWI76_RS07070 0.16 -5.3
1,487,835 - BWI76_RS07070 0.43 -2.3
1,487,847 - BWI76_RS07070 0.46 -4.1
1,487,901 - BWI76_RS07070 0.56 -3.7
1,487,962 - BWI76_RS07070 0.68 -1.1
1,488,071 + BWI76_RS07070 0.90 -3.2
1,488,148 + -1.1
1,488,156 - -2.7
1,488,158 + -2.6
1,488,158 + -3.1
1,488,344 + BWI76_RS07075 0.38 -1.2
1,488,344 + BWI76_RS07075 0.38 -2.0
1,488,375 + BWI76_RS07075 0.47 +0.5
1,488,435 + BWI76_RS07075 0.65 +0.3

Or see this region's nucleotide sequence