Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06770

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06760 and BWI76_RS06765 are separated by 161 nucleotidesBWI76_RS06765 and BWI76_RS06770 are separated by 26 nucleotidesBWI76_RS06770 and BWI76_RS06775 are separated by 468 nucleotides BWI76_RS06760: BWI76_RS06760 - maltose O-acetyltransferase, at 1,417,027 to 1,417,593 _RS06760 BWI76_RS06765: BWI76_RS06765 - transcriptional regulator, at 1,417,755 to 1,417,973 _RS06765 BWI76_RS06770: BWI76_RS06770 - Hha toxicity attenuator, at 1,418,000 to 1,418,374 _RS06770 BWI76_RS06775: BWI76_RS06775 - multidrug efflux RND transporter permease subunit, at 1,418,843 to 1,421,989 _RS06775 Position (kb) 1417 1418 1419Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1417.026 kb on - strandat 1417.093 kb on - strand, within BWI76_RS06760at 1417.165 kb on - strand, within BWI76_RS06760at 1417.196 kb on - strand, within BWI76_RS06760at 1417.227 kb on - strand, within BWI76_RS06760at 1417.290 kb on + strand, within BWI76_RS06760at 1417.297 kb on - strand, within BWI76_RS06760at 1417.408 kb on + strand, within BWI76_RS06760at 1417.503 kb on - strand, within BWI76_RS06760at 1417.503 kb on - strand, within BWI76_RS06760at 1417.511 kb on + strand, within BWI76_RS06760at 1417.526 kb on + strand, within BWI76_RS06760at 1417.534 kb on - strand, within BWI76_RS06760at 1417.537 kb on + strandat 1417.555 kb on - strandat 1417.555 kb on - strandat 1417.589 kb on + strandat 1417.599 kb on - strandat 1417.674 kb on - strandat 1417.691 kb on + strandat 1417.691 kb on - strandat 1417.691 kb on - strandat 1417.691 kb on - strandat 1417.697 kb on - strandat 1417.702 kb on - strandat 1417.767 kb on + strandat 1417.788 kb on - strand, within BWI76_RS06765at 1417.791 kb on + strand, within BWI76_RS06765at 1417.848 kb on - strand, within BWI76_RS06765at 1417.934 kb on - strand, within BWI76_RS06765at 1418.028 kb on - strandat 1418.041 kb on - strand, within BWI76_RS06770at 1418.059 kb on - strand, within BWI76_RS06770at 1418.059 kb on - strand, within BWI76_RS06770at 1418.059 kb on - strand, within BWI76_RS06770at 1418.096 kb on + strand, within BWI76_RS06770at 1418.103 kb on - strand, within BWI76_RS06770at 1418.105 kb on - strand, within BWI76_RS06770at 1418.119 kb on + strand, within BWI76_RS06770at 1418.176 kb on - strand, within BWI76_RS06770at 1418.240 kb on - strand, within BWI76_RS06770at 1418.260 kb on + strand, within BWI76_RS06770at 1418.268 kb on - strand, within BWI76_RS06770at 1418.268 kb on - strand, within BWI76_RS06770at 1418.273 kb on - strand, within BWI76_RS06770at 1418.276 kb on - strand, within BWI76_RS06770at 1418.284 kb on + strand, within BWI76_RS06770at 1418.284 kb on + strand, within BWI76_RS06770at 1418.284 kb on + strand, within BWI76_RS06770at 1418.291 kb on - strand, within BWI76_RS06770at 1418.292 kb on - strand, within BWI76_RS06770at 1418.292 kb on - strand, within BWI76_RS06770at 1418.292 kb on - strand, within BWI76_RS06770at 1418.292 kb on - strand, within BWI76_RS06770at 1418.292 kb on - strand, within BWI76_RS06770at 1418.309 kb on + strand, within BWI76_RS06770at 1418.312 kb on - strand, within BWI76_RS06770at 1418.314 kb on + strand, within BWI76_RS06770at 1418.316 kb on + strand, within BWI76_RS06770at 1418.317 kb on - strand, within BWI76_RS06770at 1418.328 kb on + strand, within BWI76_RS06770at 1418.328 kb on + strand, within BWI76_RS06770at 1418.328 kb on + strand, within BWI76_RS06770at 1418.328 kb on + strand, within BWI76_RS06770at 1418.336 kb on - strand, within BWI76_RS06770at 1418.336 kb on - strand, within BWI76_RS06770at 1418.336 kb on - strand, within BWI76_RS06770at 1418.336 kb on - strand, within BWI76_RS06770at 1418.336 kb on - strand, within BWI76_RS06770at 1418.336 kb on - strand, within BWI76_RS06770at 1418.336 kb on - strand, within BWI76_RS06770at 1418.336 kb on - strand, within BWI76_RS06770at 1418.384 kb on - strandat 1418.384 kb on - strandat 1418.385 kb on + strandat 1418.385 kb on + strandat 1418.385 kb on + strandat 1418.392 kb on - strandat 1418.392 kb on - strandat 1418.395 kb on + strandat 1418.395 kb on + strandat 1418.395 kb on + strandat 1418.395 kb on + strandat 1418.395 kb on + strandat 1418.395 kb on + strandat 1418.395 kb on + strandat 1418.403 kb on - strandat 1418.403 kb on - strandat 1418.403 kb on - strandat 1418.407 kb on + strandat 1418.407 kb on + strandat 1418.415 kb on - strandat 1418.417 kb on + strandat 1418.417 kb on + strandat 1418.431 kb on + strandat 1418.431 kb on + strandat 1418.431 kb on + strandat 1418.434 kb on - strandat 1418.434 kb on - strandat 1418.439 kb on - strandat 1418.439 kb on - strandat 1418.439 kb on - strandat 1418.439 kb on - strandat 1418.472 kb on - strandat 1418.472 kb on - strandat 1418.472 kb on - strandat 1418.473 kb on - strandat 1418.473 kb on - strandat 1418.473 kb on - strandat 1418.473 kb on - strandat 1418.484 kb on + strandat 1418.555 kb on - strandat 1418.558 kb on + strandat 1418.564 kb on + strandat 1418.564 kb on + strandat 1418.564 kb on + strandat 1418.564 kb on + strandat 1418.572 kb on - strandat 1418.572 kb on - strandat 1418.572 kb on - strandat 1418.572 kb on - strandat 1418.592 kb on - strandat 1418.596 kb on + strandat 1418.624 kb on + strandat 1418.756 kb on - strandat 1418.791 kb on + strandat 1418.791 kb on + strandat 1418.799 kb on - strandat 1418.832 kb on + strandat 1418.835 kb on - strandat 1418.837 kb on - strandat 1418.841 kb on + strandat 1418.849 kb on - strandat 1418.849 kb on - strandat 1418.849 kb on - strandat 1418.864 kb on + strandat 1418.872 kb on - strandat 1418.916 kb on - strandat 1418.918 kb on - strandat 1418.918 kb on - strandat 1419.192 kb on - strand, within BWI76_RS06775

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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1,417,026 - +0.9
1,417,093 - BWI76_RS06760 0.12 -0.7
1,417,165 - BWI76_RS06760 0.24 -3.1
1,417,196 - BWI76_RS06760 0.30 -0.3
1,417,227 - BWI76_RS06760 0.35 +1.2
1,417,290 + BWI76_RS06760 0.46 +1.6
1,417,297 - BWI76_RS06760 0.48 -0.0
1,417,408 + BWI76_RS06760 0.67 -0.7
1,417,503 - BWI76_RS06760 0.84 -1.3
1,417,503 - BWI76_RS06760 0.84 -0.6
1,417,511 + BWI76_RS06760 0.85 +1.0
1,417,526 + BWI76_RS06760 0.88 +0.2
1,417,534 - BWI76_RS06760 0.89 -0.0
1,417,537 + +0.6
1,417,555 - -2.1
1,417,555 - +0.7
1,417,589 + +0.2
1,417,599 - +0.5
1,417,674 - -0.1
1,417,691 + +1.0
1,417,691 - -0.1
1,417,691 - +0.3
1,417,691 - +1.3
1,417,697 - -1.6
1,417,702 - +0.9
1,417,767 + -1.1
1,417,788 - BWI76_RS06765 0.15 +0.2
1,417,791 + BWI76_RS06765 0.16 -2.5
1,417,848 - BWI76_RS06765 0.42 -2.7
1,417,934 - BWI76_RS06765 0.82 -1.3
1,418,028 - +0.2
1,418,041 - BWI76_RS06770 0.11 -1.1
1,418,059 - BWI76_RS06770 0.16 -2.1
1,418,059 - BWI76_RS06770 0.16 -1.5
1,418,059 - BWI76_RS06770 0.16 -2.4
1,418,096 + BWI76_RS06770 0.26 -0.8
1,418,103 - BWI76_RS06770 0.27 -1.0
1,418,105 - BWI76_RS06770 0.28 -0.7
1,418,119 + BWI76_RS06770 0.32 -2.6
1,418,176 - BWI76_RS06770 0.47 -0.2
1,418,240 - BWI76_RS06770 0.64 -0.0
1,418,260 + BWI76_RS06770 0.69 -1.4
1,418,268 - BWI76_RS06770 0.71 -2.1
1,418,268 - BWI76_RS06770 0.71 -0.4
1,418,273 - BWI76_RS06770 0.73 -1.8
1,418,276 - BWI76_RS06770 0.74 -1.1
1,418,284 + BWI76_RS06770 0.76 -1.5
1,418,284 + BWI76_RS06770 0.76 +0.0
1,418,284 + BWI76_RS06770 0.76 -2.0
1,418,291 - BWI76_RS06770 0.78 -0.8
1,418,292 - BWI76_RS06770 0.78 -0.8
1,418,292 - BWI76_RS06770 0.78 -2.2
1,418,292 - BWI76_RS06770 0.78 -2.4
1,418,292 - BWI76_RS06770 0.78 -1.8
1,418,292 - BWI76_RS06770 0.78 -0.3
1,418,309 + BWI76_RS06770 0.82 -1.1
1,418,312 - BWI76_RS06770 0.83 +0.4
1,418,314 + BWI76_RS06770 0.84 +0.2
1,418,316 + BWI76_RS06770 0.84 -0.3
1,418,317 - BWI76_RS06770 0.85 -0.4
1,418,328 + BWI76_RS06770 0.87 +1.8
1,418,328 + BWI76_RS06770 0.87 -1.0
1,418,328 + BWI76_RS06770 0.87 -3.4
1,418,328 + BWI76_RS06770 0.87 +0.8
1,418,336 - BWI76_RS06770 0.90 +0.9
1,418,336 - BWI76_RS06770 0.90 -1.0
1,418,336 - BWI76_RS06770 0.90 -2.7
1,418,336 - BWI76_RS06770 0.90 +1.4
1,418,336 - BWI76_RS06770 0.90 -0.3
1,418,336 - BWI76_RS06770 0.90 +0.0
1,418,336 - BWI76_RS06770 0.90 +0.4
1,418,336 - BWI76_RS06770 0.90 -2.5
1,418,384 - -0.3
1,418,384 - -0.5
1,418,385 + +0.5
1,418,385 + -2.4
1,418,385 + -2.5
1,418,392 - +0.0
1,418,392 - +1.6
1,418,395 + +0.5
1,418,395 + -0.9
1,418,395 + -0.7
1,418,395 + -0.9
1,418,395 + -1.2
1,418,395 + -0.8
1,418,395 + +0.7
1,418,403 - -0.1
1,418,403 - -1.0
1,418,403 - -1.3
1,418,407 + -0.4
1,418,407 + -0.4
1,418,415 - -0.6
1,418,417 + -1.4
1,418,417 + +1.8
1,418,431 + -0.8
1,418,431 + -0.1
1,418,431 + -1.2
1,418,434 - -0.5
1,418,434 - -0.5
1,418,439 - +0.1
1,418,439 - -0.5
1,418,439 - -1.2
1,418,439 - +1.5
1,418,472 - -0.3
1,418,472 - -1.2
1,418,472 - +0.0
1,418,473 - -0.5
1,418,473 - +0.7
1,418,473 - -0.1
1,418,473 - -0.8
1,418,484 + -0.9
1,418,555 - +0.6
1,418,558 + -2.2
1,418,564 + +1.3
1,418,564 + +0.7
1,418,564 + -1.3
1,418,564 + -1.3
1,418,572 - -2.1
1,418,572 - -0.4
1,418,572 - -1.0
1,418,572 - -0.7
1,418,592 - +0.0
1,418,596 + +1.0
1,418,624 + -1.6
1,418,756 - +0.9
1,418,791 + +0.5
1,418,791 + -0.2
1,418,799 - -1.8
1,418,832 + +1.0
1,418,835 - -0.8
1,418,837 - +0.5
1,418,841 + -1.0
1,418,849 - +0.2
1,418,849 - -0.7
1,418,849 - -1.0
1,418,864 + -1.2
1,418,872 - +0.6
1,418,916 - -0.5
1,418,918 - +0.6
1,418,918 - +0.5
1,419,192 - BWI76_RS06775 0.11 -0.1

Or see this region's nucleotide sequence