Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05005 and BWI76_RS05010 are separated by 51 nucleotides BWI76_RS05010 and BWI76_RS05015 are separated by 61 nucleotides BWI76_RS05015 and BWI76_RS05020 are separated by 164 nucleotides BWI76_RS05020 and BWI76_RS05025 overlap by 1 nucleotides
BWI76_RS05005: BWI76_RS05005 - polynucleotide adenylyltransferase, at 1,049,235 to 1,050,632
_RS05005
BWI76_RS05010: BWI76_RS05010 - tRNA glutamyl-Q synthetase, at 1,050,684 to 1,051,565
_RS05010
BWI76_RS05015: BWI76_RS05015 - transcriptional regulator, at 1,051,627 to 1,052,082
_RS05015
BWI76_RS05020: BWI76_RS05020 - sugar fermentation stimulation protein SfsA, at 1,052,247 to 1,052,963
_RS05020
BWI76_RS05025: BWI76_RS05025 - 2'-5' RNA ligase, at 1,052,963 to 1,053,499
_RS05025
Position (kb)
1051
1052
1053 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1050.692 kb on - strand at 1050.692 kb on - strand at 1050.761 kb on + strand at 1050.844 kb on + strand, within BWI76_RS05010 at 1050.844 kb on + strand, within BWI76_RS05010 at 1050.852 kb on - strand, within BWI76_RS05010 at 1051.312 kb on - strand, within BWI76_RS05010 at 1051.541 kb on + strand at 1051.571 kb on + strand at 1051.676 kb on + strand, within BWI76_RS05015 at 1051.867 kb on - strand, within BWI76_RS05015 at 1051.894 kb on - strand, within BWI76_RS05015 at 1051.955 kb on - strand, within BWI76_RS05015 at 1052.065 kb on + strand at 1052.187 kb on - strand at 1052.187 kb on - strand at 1052.187 kb on - strand at 1052.195 kb on - strand at 1052.195 kb on - strand at 1052.197 kb on - strand at 1052.264 kb on + strand at 1052.286 kb on - strand at 1052.291 kb on - strand at 1052.330 kb on + strand, within BWI76_RS05020 at 1052.381 kb on - strand, within BWI76_RS05020 at 1052.382 kb on + strand, within BWI76_RS05020 at 1052.390 kb on - strand, within BWI76_RS05020 at 1052.395 kb on + strand, within BWI76_RS05020 at 1052.395 kb on + strand, within BWI76_RS05020 at 1052.426 kb on - strand, within BWI76_RS05020 at 1052.524 kb on + strand, within BWI76_RS05020 at 1052.531 kb on - strand, within BWI76_RS05020 at 1052.543 kb on + strand, within BWI76_RS05020 at 1052.656 kb on + strand, within BWI76_RS05020 at 1052.779 kb on - strand, within BWI76_RS05020 at 1052.809 kb on - strand, within BWI76_RS05020 at 1052.823 kb on - strand, within BWI76_RS05020 at 1052.851 kb on + strand, within BWI76_RS05020 at 1052.860 kb on - strand, within BWI76_RS05020 at 1052.862 kb on + strand, within BWI76_RS05020 at 1052.871 kb on - strand, within BWI76_RS05020 at 1052.881 kb on - strand, within BWI76_RS05020
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 1,050,692 - +0.0 1,050,692 - +0.5 1,050,761 + -0.3 1,050,844 + BWI76_RS05010 0.18 +0.4 1,050,844 + BWI76_RS05010 0.18 -0.3 1,050,852 - BWI76_RS05010 0.19 +0.3 1,051,312 - BWI76_RS05010 0.71 -2.3 1,051,541 + +1.9 1,051,571 + -0.1 1,051,676 + BWI76_RS05015 0.11 -3.1 1,051,867 - BWI76_RS05015 0.53 +0.8 1,051,894 - BWI76_RS05015 0.59 -0.6 1,051,955 - BWI76_RS05015 0.72 -2.7 1,052,065 + -3.3 1,052,187 - +0.6 1,052,187 - -1.4 1,052,187 - -0.0 1,052,195 - +1.1 1,052,195 - +0.1 1,052,197 - -1.1 1,052,264 + +0.6 1,052,286 - +0.1 1,052,291 - +0.1 1,052,330 + BWI76_RS05020 0.12 +0.1 1,052,381 - BWI76_RS05020 0.19 +0.3 1,052,382 + BWI76_RS05020 0.19 -0.3 1,052,390 - BWI76_RS05020 0.20 +0.0 1,052,395 + BWI76_RS05020 0.21 +0.4 1,052,395 + BWI76_RS05020 0.21 +1.4 1,052,426 - BWI76_RS05020 0.25 -0.7 1,052,524 + BWI76_RS05020 0.39 -1.1 1,052,531 - BWI76_RS05020 0.40 -0.6 1,052,543 + BWI76_RS05020 0.41 -0.2 1,052,656 + BWI76_RS05020 0.57 +1.2 1,052,779 - BWI76_RS05020 0.74 +0.2 1,052,809 - BWI76_RS05020 0.78 +0.1 1,052,823 - BWI76_RS05020 0.80 -0.2 1,052,851 + BWI76_RS05020 0.84 +0.6 1,052,860 - BWI76_RS05020 0.85 +0.3 1,052,862 + BWI76_RS05020 0.86 -0.2 1,052,871 - BWI76_RS05020 0.87 -1.0 1,052,881 - BWI76_RS05020 0.88 -0.3
Or see this region's nucleotide sequence