Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04705 and BWI76_RS04710 are separated by 444 nucleotides BWI76_RS04710 and BWI76_RS04715 overlap by 2 nucleotides BWI76_RS04715 and BWI76_RS04720 are separated by 1 nucleotides BWI76_RS04720 and BWI76_RS04725 overlap by 4 nucleotides
BWI76_RS04705: BWI76_RS04705 - DNA-binding transcriptional regulator FruR, at 982,295 to 983,299
_RS04705
BWI76_RS04710: BWI76_RS04710 - hypothetical protein, at 983,744 to 983,926
_RS04710
BWI76_RS04715: BWI76_RS04715 - division/cell wall cluster transcriptional repressor MraZ, at 983,925 to 984,383
_RS04715
BWI76_RS04720: BWI76_RS04720 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase, at 984,385 to 985,326
_RS04720
BWI76_RS04725: BWI76_RS04725 - cell division protein FtsL, at 985,323 to 985,688
_RS04725
Position (kb)
983
984
985 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 983.020 kb on + strand, within BWI76_RS04705 at 983.028 kb on - strand, within BWI76_RS04705 at 983.066 kb on - strand, within BWI76_RS04705 at 983.186 kb on - strand, within BWI76_RS04705 at 983.251 kb on - strand at 983.265 kb on + strand at 983.282 kb on + strand at 983.297 kb on - strand at 983.318 kb on - strand at 983.324 kb on + strand at 983.344 kb on - strand at 983.346 kb on - strand at 983.393 kb on - strand at 983.414 kb on - strand at 983.474 kb on + strand at 983.482 kb on - strand at 983.554 kb on + strand at 983.565 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.572 kb on + strand at 983.573 kb on - strand at 983.574 kb on + strand at 983.575 kb on + strand at 983.577 kb on + strand at 983.577 kb on + strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.580 kb on - strand at 983.582 kb on - strand at 983.619 kb on + strand at 983.626 kb on - strand at 983.627 kb on - strand at 983.636 kb on - strand at 983.637 kb on + strand at 983.638 kb on + strand at 983.670 kb on - strand at 983.710 kb on + strand at 983.718 kb on - strand at 983.824 kb on + strand, within BWI76_RS04710 at 983.826 kb on + strand, within BWI76_RS04710 at 983.834 kb on - strand, within BWI76_RS04710 at 983.849 kb on - strand, within BWI76_RS04710 at 983.922 kb on + strand at 984.062 kb on + strand, within BWI76_RS04715 at 984.335 kb on + strand, within BWI76_RS04715
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 983,020 + BWI76_RS04705 0.72 +1.0 983,028 - BWI76_RS04705 0.73 -0.2 983,066 - BWI76_RS04705 0.77 -0.1 983,186 - BWI76_RS04705 0.89 -2.1 983,251 - +1.3 983,265 + +0.2 983,282 + -0.7 983,297 - -1.0 983,318 - +0.7 983,324 + +0.3 983,344 - -0.0 983,346 - +1.0 983,393 - +2.8 983,414 - +0.1 983,474 + -0.4 983,482 - -0.3 983,554 + +0.3 983,565 + +0.2 983,572 + -0.4 983,572 + -0.7 983,572 + +0.0 983,572 + +0.4 983,572 + +0.8 983,572 + +0.0 983,573 - +0.4 983,574 + +0.4 983,575 + +0.0 983,577 + +0.0 983,577 + +0.2 983,580 - +0.6 983,580 - -1.8 983,580 - +0.2 983,580 - +0.2 983,580 - +0.1 983,580 - +0.2 983,580 - -0.3 983,580 - +0.7 983,580 - -0.3 983,580 - -0.0 983,580 - -0.0 983,580 - +0.6 983,580 - -0.1 983,582 - -0.7 983,619 + +0.4 983,626 - +0.1 983,627 - -1.0 983,636 - -0.3 983,637 + +0.8 983,638 + +0.9 983,670 - +0.6 983,710 + -0.0 983,718 - -2.5 983,824 + BWI76_RS04710 0.44 +0.3 983,826 + BWI76_RS04710 0.45 +0.8 983,834 - BWI76_RS04710 0.49 +0.3 983,849 - BWI76_RS04710 0.57 +0.6 983,922 + -2.9 984,062 + BWI76_RS04715 0.30 -1.4 984,335 + BWI76_RS04715 0.89 -2.6
Or see this region's nucleotide sequence