Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04715

Experiment: L-aspartic (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS04705 and BWI76_RS04710 are separated by 444 nucleotidesBWI76_RS04710 and BWI76_RS04715 overlap by 2 nucleotidesBWI76_RS04715 and BWI76_RS04720 are separated by 1 nucleotidesBWI76_RS04720 and BWI76_RS04725 overlap by 4 nucleotides BWI76_RS04705: BWI76_RS04705 - DNA-binding transcriptional regulator FruR, at 982,295 to 983,299 _RS04705 BWI76_RS04710: BWI76_RS04710 - hypothetical protein, at 983,744 to 983,926 _RS04710 BWI76_RS04715: BWI76_RS04715 - division/cell wall cluster transcriptional repressor MraZ, at 983,925 to 984,383 _RS04715 BWI76_RS04720: BWI76_RS04720 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase, at 984,385 to 985,326 _RS04720 BWI76_RS04725: BWI76_RS04725 - cell division protein FtsL, at 985,323 to 985,688 _RS04725 Position (kb) 983 984 985Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 983.020 kb on + strand, within BWI76_RS04705at 983.028 kb on - strand, within BWI76_RS04705at 983.066 kb on - strand, within BWI76_RS04705at 983.186 kb on - strand, within BWI76_RS04705at 983.251 kb on - strandat 983.265 kb on + strandat 983.282 kb on + strandat 983.297 kb on - strandat 983.318 kb on - strandat 983.324 kb on + strandat 983.344 kb on - strandat 983.346 kb on - strandat 983.393 kb on - strandat 983.414 kb on - strandat 983.474 kb on + strandat 983.482 kb on - strandat 983.554 kb on + strandat 983.565 kb on + strandat 983.572 kb on + strandat 983.572 kb on + strandat 983.572 kb on + strandat 983.572 kb on + strandat 983.572 kb on + strandat 983.572 kb on + strandat 983.573 kb on - strandat 983.574 kb on + strandat 983.575 kb on + strandat 983.577 kb on + strandat 983.577 kb on + strandat 983.580 kb on - strandat 983.580 kb on - strandat 983.580 kb on - strandat 983.580 kb on - strandat 983.580 kb on - strandat 983.580 kb on - strandat 983.580 kb on - strandat 983.580 kb on - strandat 983.580 kb on - strandat 983.580 kb on - strandat 983.580 kb on - strandat 983.580 kb on - strandat 983.580 kb on - strandat 983.582 kb on - strandat 983.619 kb on + strandat 983.626 kb on - strandat 983.627 kb on - strandat 983.636 kb on - strandat 983.637 kb on + strandat 983.638 kb on + strandat 983.670 kb on - strandat 983.710 kb on + strandat 983.718 kb on - strandat 983.824 kb on + strand, within BWI76_RS04710at 983.826 kb on + strand, within BWI76_RS04710at 983.834 kb on - strand, within BWI76_RS04710at 983.849 kb on - strand, within BWI76_RS04710at 983.922 kb on + strandat 984.062 kb on + strand, within BWI76_RS04715at 984.335 kb on + strand, within BWI76_RS04715

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
remove
983,020 + BWI76_RS04705 0.72 +1.0
983,028 - BWI76_RS04705 0.73 -0.2
983,066 - BWI76_RS04705 0.77 -0.1
983,186 - BWI76_RS04705 0.89 -2.1
983,251 - +1.3
983,265 + +0.2
983,282 + -0.7
983,297 - -1.0
983,318 - +0.7
983,324 + +0.3
983,344 - -0.0
983,346 - +1.0
983,393 - +2.8
983,414 - +0.1
983,474 + -0.4
983,482 - -0.3
983,554 + +0.3
983,565 + +0.2
983,572 + -0.4
983,572 + -0.7
983,572 + +0.0
983,572 + +0.4
983,572 + +0.8
983,572 + +0.0
983,573 - +0.4
983,574 + +0.4
983,575 + +0.0
983,577 + +0.0
983,577 + +0.2
983,580 - +0.6
983,580 - -1.8
983,580 - +0.2
983,580 - +0.2
983,580 - +0.1
983,580 - +0.2
983,580 - -0.3
983,580 - +0.7
983,580 - -0.3
983,580 - -0.0
983,580 - -0.0
983,580 - +0.6
983,580 - -0.1
983,582 - -0.7
983,619 + +0.4
983,626 - +0.1
983,627 - -1.0
983,636 - -0.3
983,637 + +0.8
983,638 + +0.9
983,670 - +0.6
983,710 + -0.0
983,718 - -2.5
983,824 + BWI76_RS04710 0.44 +0.3
983,826 + BWI76_RS04710 0.45 +0.8
983,834 - BWI76_RS04710 0.49 +0.3
983,849 - BWI76_RS04710 0.57 +0.6
983,922 + -2.9
984,062 + BWI76_RS04715 0.30 -1.4
984,335 + BWI76_RS04715 0.89 -2.6

Or see this region's nucleotide sequence