Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04665 and BWI76_RS04670 are separated by 10 nucleotides BWI76_RS04670 and BWI76_RS04675 are separated by 2 nucleotides
BWI76_RS04665: BWI76_RS04665 - 3-isopropylmalate dehydratase small subunit, at 973,069 to 973,674
_RS04665
BWI76_RS04670: BWI76_RS04670 - 3-isopropylmalate dehydratase large subunit, at 973,685 to 975,085
_RS04670
BWI76_RS04675: BWI76_RS04675 - 3-isopropylmalate dehydrogenase, at 975,088 to 976,179
_RS04675
Position (kb) 973
974
975
976 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2 at 972.692 kb on - strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.704 kb on + strand at 972.712 kb on - strand at 972.712 kb on - strand at 972.712 kb on - strand at 972.712 kb on - strand at 972.712 kb on - strand at 972.712 kb on - strand at 972.738 kb on + strand at 972.788 kb on + strand at 972.895 kb on + strand at 973.046 kb on - strand at 973.046 kb on - strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.049 kb on + strand at 973.050 kb on - strand at 973.050 kb on - strand at 973.055 kb on - strand at 973.057 kb on - strand at 973.057 kb on - strand at 973.057 kb on - strand at 973.057 kb on - strand at 973.057 kb on - strand at 973.057 kb on - strand at 973.057 kb on - strand at 973.057 kb on - strand at 973.057 kb on - strand at 973.057 kb on - strand at 973.075 kb on + strand at 973.083 kb on - strand at 973.083 kb on - strand at 973.089 kb on + strand at 973.116 kb on - strand at 973.128 kb on + strand at 973.128 kb on + strand at 973.128 kb on + strand at 973.128 kb on + strand at 973.128 kb on + strand at 973.128 kb on + strand at 973.128 kb on - strand at 973.129 kb on + strand at 973.129 kb on + strand at 973.134 kb on + strand, within BWI76_RS04665 at 973.134 kb on + strand, within BWI76_RS04665 at 973.134 kb on + strand, within BWI76_RS04665 at 973.134 kb on + strand, within BWI76_RS04665 at 973.134 kb on + strand, within BWI76_RS04665 at 973.134 kb on + strand, within BWI76_RS04665 at 973.134 kb on + strand, within BWI76_RS04665 at 973.134 kb on + strand, within BWI76_RS04665 at 973.134 kb on + strand, within BWI76_RS04665 at 973.134 kb on + strand, within BWI76_RS04665 at 973.134 kb on + strand, within BWI76_RS04665 at 973.136 kb on - strand, within BWI76_RS04665 at 973.136 kb on - strand, within BWI76_RS04665 at 973.136 kb on - strand, within BWI76_RS04665 at 973.136 kb on - strand, within BWI76_RS04665 at 973.136 kb on - strand, within BWI76_RS04665 at 973.139 kb on + strand, within BWI76_RS04665 at 973.139 kb on + strand, within BWI76_RS04665 at 973.142 kb on - strand, within BWI76_RS04665 at 973.142 kb on - strand, within BWI76_RS04665 at 973.142 kb on - strand, within BWI76_RS04665 at 973.142 kb on - strand, within BWI76_RS04665 at 973.142 kb on - strand, within BWI76_RS04665 at 973.142 kb on - strand, within BWI76_RS04665 at 973.142 kb on - strand, within BWI76_RS04665 at 973.142 kb on - strand, within BWI76_RS04665 at 973.142 kb on - strand, within BWI76_RS04665 at 973.142 kb on - strand, within BWI76_RS04665 at 973.143 kb on + strand, within BWI76_RS04665 at 973.143 kb on + strand, within BWI76_RS04665 at 973.144 kb on + strand, within BWI76_RS04665 at 973.144 kb on + strand, within BWI76_RS04665 at 973.144 kb on + strand, within BWI76_RS04665 at 973.144 kb on + strand, within BWI76_RS04665 at 973.144 kb on + strand at 973.147 kb on - strand, within BWI76_RS04665 at 973.147 kb on - strand, within BWI76_RS04665 at 973.151 kb on + strand, within BWI76_RS04665 at 973.151 kb on + strand, within BWI76_RS04665 at 973.152 kb on - strand, within BWI76_RS04665 at 973.152 kb on - strand, within BWI76_RS04665 at 973.152 kb on - strand, within BWI76_RS04665 at 973.152 kb on - strand, within BWI76_RS04665 at 973.152 kb on - strand, within BWI76_RS04665 at 973.152 kb on - strand, within BWI76_RS04665 at 973.152 kb on - strand, within BWI76_RS04665 at 973.152 kb on - strand, within BWI76_RS04665 at 973.192 kb on + strand, within BWI76_RS04665 at 973.211 kb on + strand, within BWI76_RS04665 at 973.211 kb on + strand, within BWI76_RS04665 at 973.219 kb on - strand, within BWI76_RS04665 at 973.219 kb on - strand, within BWI76_RS04665 at 973.256 kb on + strand, within BWI76_RS04665 at 973.279 kb on - strand, within BWI76_RS04665 at 973.303 kb on - strand, within BWI76_RS04665 at 973.361 kb on - strand, within BWI76_RS04665 at 973.407 kb on + strand, within BWI76_RS04665 at 973.463 kb on - strand, within BWI76_RS04665 at 973.466 kb on + strand, within BWI76_RS04665 at 973.466 kb on + strand, within BWI76_RS04665 at 973.499 kb on + strand, within BWI76_RS04665 at 973.554 kb on + strand, within BWI76_RS04665 at 973.670 kb on + strand at 973.751 kb on + strand at 973.759 kb on - strand at 973.852 kb on - strand, within BWI76_RS04670 at 973.891 kb on - strand, within BWI76_RS04670 at 973.945 kb on + strand, within BWI76_RS04670 at 974.038 kb on + strand, within BWI76_RS04670 at 974.120 kb on + strand, within BWI76_RS04670 at 974.272 kb on - strand, within BWI76_RS04670 at 974.372 kb on + strand, within BWI76_RS04670 at 974.395 kb on - strand, within BWI76_RS04670 at 974.433 kb on + strand, within BWI76_RS04670 at 974.439 kb on - strand, within BWI76_RS04670 at 974.477 kb on + strand, within BWI76_RS04670 at 974.480 kb on - strand, within BWI76_RS04670 at 974.741 kb on - strand at 974.797 kb on + strand, within BWI76_RS04670 at 974.894 kb on + strand, within BWI76_RS04670 at 974.924 kb on - strand, within BWI76_RS04670 at 974.924 kb on - strand, within BWI76_RS04670 at 975.006 kb on + strand at 975.145 kb on - strand at 975.438 kb on + strand, within BWI76_RS04675 at 975.473 kb on + strand, within BWI76_RS04675 at 975.788 kb on - strand, within BWI76_RS04675 at 975.833 kb on - strand, within BWI76_RS04675 at 975.841 kb on - strand, within BWI76_RS04675 at 975.899 kb on + strand, within BWI76_RS04675 at 975.900 kb on - strand, within BWI76_RS04675
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 972,692 - +0.9 972,704 + -2.3 972,704 + +0.8 972,704 + -0.5 972,704 + -0.7 972,704 + -0.3 972,704 + -0.4 972,704 + +0.1 972,704 + +0.1 972,704 + -2.2 972,704 + -0.7 972,704 + +1.1 972,704 + +0.1 972,704 + -1.6 972,704 + -1.8 972,704 + -1.1 972,704 + +0.2 972,704 + -2.1 972,704 + +0.1 972,712 - -0.2 972,712 - +0.1 972,712 - +2.1 972,712 - -0.2 972,712 - -0.5 972,712 - -1.9 972,738 + +0.2 972,788 + +0.3 972,895 + +0.3 973,046 - -0.1 973,046 - -0.0 973,049 + +0.7 973,049 + +1.0 973,049 + +0.6 973,049 + -0.6 973,049 + +0.6 973,049 + -0.7 973,049 + -0.5 973,049 + -0.4 973,049 + -0.9 973,049 + -2.0 973,049 + +0.1 973,049 + +0.6 973,049 + -0.4 973,049 + -0.4 973,049 + +0.7 973,049 + +0.6 973,049 + +1.2 973,050 - -0.8 973,050 - -0.5 973,055 - -0.4 973,057 - +0.8 973,057 - +0.5 973,057 - +0.5 973,057 - -0.0 973,057 - -0.8 973,057 - +0.5 973,057 - +1.1 973,057 - +0.8 973,057 - -0.3 973,057 - +0.6 973,075 + -0.9 973,083 - -1.1 973,083 - +0.3 973,089 + +0.8 973,116 - -5.3 973,128 + +1.1 973,128 + -1.7 973,128 + -4.0 973,128 + -3.7 973,128 + -3.2 973,128 + -4.6 973,128 - -0.5 973,129 + -3.2 973,129 + -2.5 973,134 + BWI76_RS04665 0.11 -1.6 973,134 + BWI76_RS04665 0.11 -3.1 973,134 + BWI76_RS04665 0.11 -0.5 973,134 + BWI76_RS04665 0.11 -2.0 973,134 + BWI76_RS04665 0.11 -3.6 973,134 + BWI76_RS04665 0.11 -4.3 973,134 + BWI76_RS04665 0.11 -4.0 973,134 + BWI76_RS04665 0.11 -0.5 973,134 + BWI76_RS04665 0.11 -4.1 973,134 + BWI76_RS04665 0.11 -1.7 973,134 + BWI76_RS04665 0.11 -4.5 973,136 - BWI76_RS04665 0.11 -4.3 973,136 - BWI76_RS04665 0.11 -6.1 973,136 - BWI76_RS04665 0.11 -2.2 973,136 - BWI76_RS04665 0.11 -4.5 973,136 - BWI76_RS04665 0.11 -5.7 973,139 + BWI76_RS04665 0.12 -3.3 973,139 + BWI76_RS04665 0.12 -0.7 973,142 - BWI76_RS04665 0.12 -2.8 973,142 - BWI76_RS04665 0.12 -4.5 973,142 - BWI76_RS04665 0.12 +1.1 973,142 - BWI76_RS04665 0.12 -3.2 973,142 - BWI76_RS04665 0.12 -3.5 973,142 - BWI76_RS04665 0.12 -5.0 973,142 - BWI76_RS04665 0.12 -2.2 973,142 - BWI76_RS04665 0.12 -2.7 973,142 - BWI76_RS04665 0.12 -5.3 973,142 - BWI76_RS04665 0.12 -2.0 973,143 + BWI76_RS04665 0.12 -4.6 973,143 + BWI76_RS04665 0.12 -6.0 973,144 + BWI76_RS04665 0.12 -1.8 973,144 + BWI76_RS04665 0.12 -4.5 973,144 + BWI76_RS04665 0.12 -3.1 973,144 + BWI76_RS04665 0.12 -3.5 973,144 + +1.1 973,147 - BWI76_RS04665 0.13 -4.6 973,147 - BWI76_RS04665 0.13 -5.6 973,151 + BWI76_RS04665 0.14 -4.0 973,151 + BWI76_RS04665 0.14 -3.2 973,152 - BWI76_RS04665 0.14 -4.6 973,152 - BWI76_RS04665 0.14 -5.4 973,152 - BWI76_RS04665 0.14 -1.5 973,152 - BWI76_RS04665 0.14 -4.3 973,152 - BWI76_RS04665 0.14 -1.9 973,152 - BWI76_RS04665 0.14 -1.1 973,152 - BWI76_RS04665 0.14 -5.0 973,152 - BWI76_RS04665 0.14 -3.1 973,192 + BWI76_RS04665 0.20 -2.1 973,211 + BWI76_RS04665 0.23 -4.1 973,211 + BWI76_RS04665 0.23 -4.2 973,219 - BWI76_RS04665 0.25 -4.2 973,219 - BWI76_RS04665 0.25 -3.9 973,256 + BWI76_RS04665 0.31 -3.7 973,279 - BWI76_RS04665 0.35 -2.9 973,303 - BWI76_RS04665 0.39 -5.5 973,361 - BWI76_RS04665 0.48 -3.4 973,407 + BWI76_RS04665 0.56 -4.9 973,463 - BWI76_RS04665 0.65 -4.8 973,466 + BWI76_RS04665 0.66 -5.3 973,466 + BWI76_RS04665 0.66 +0.6 973,499 + BWI76_RS04665 0.71 -5.3 973,554 + BWI76_RS04665 0.80 -5.1 973,670 + -5.8 973,751 + -3.3 973,759 - -3.1 973,852 - BWI76_RS04670 0.12 -5.3 973,891 - BWI76_RS04670 0.15 -3.4 973,945 + BWI76_RS04670 0.19 -4.5 974,038 + BWI76_RS04670 0.25 -1.9 974,120 + BWI76_RS04670 0.31 -3.3 974,272 - BWI76_RS04670 0.42 -3.7 974,372 + BWI76_RS04670 0.49 -4.9 974,395 - BWI76_RS04670 0.51 -3.1 974,433 + BWI76_RS04670 0.53 -3.8 974,439 - BWI76_RS04670 0.54 -3.7 974,477 + BWI76_RS04670 0.57 -3.2 974,480 - BWI76_RS04670 0.57 -4.2 974,741 - -0.7 974,797 + BWI76_RS04670 0.79 -2.0 974,894 + BWI76_RS04670 0.86 -3.3 974,924 - BWI76_RS04670 0.88 -3.9 974,924 - BWI76_RS04670 0.88 -1.3 975,006 + -0.3 975,145 - -1.1 975,438 + BWI76_RS04675 0.32 -3.4 975,473 + BWI76_RS04675 0.35 -3.4 975,788 - BWI76_RS04675 0.64 -5.5 975,833 - BWI76_RS04675 0.68 -4.4 975,841 - BWI76_RS04675 0.69 -2.5 975,899 + BWI76_RS04675 0.74 -6.1 975,900 - BWI76_RS04675 0.74 -3.3
Or see this region's nucleotide sequence