Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04645

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS04640 and BWI76_RS04645 are separated by 37 nucleotidesBWI76_RS04645 and BWI76_RS04650 are separated by 33 nucleotides BWI76_RS04640: BWI76_RS04640 - LysR family transcriptional regulator, at 966,808 to 967,704 _RS04640 BWI76_RS04645: BWI76_RS04645 - 3-dehydroquinase, at 967,742 to 968,497 _RS04645 BWI76_RS04650: BWI76_RS04650 - MFS transporter, at 968,531 to 969,745 _RS04650 Position (kb) 967 968 969Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 966.748 kb on - strandat 966.843 kb on + strandat 966.843 kb on + strandat 966.851 kb on - strandat 966.851 kb on - strandat 966.851 kb on - strandat 966.855 kb on + strandat 966.861 kb on + strandat 966.863 kb on - strandat 966.863 kb on - strandat 966.872 kb on + strandat 966.873 kb on - strandat 966.897 kb on + strandat 966.898 kb on + strand, within BWI76_RS04640at 966.931 kb on + strandat 966.950 kb on + strand, within BWI76_RS04640at 966.951 kb on - strandat 966.958 kb on - strand, within BWI76_RS04640at 966.974 kb on + strand, within BWI76_RS04640at 966.974 kb on + strand, within BWI76_RS04640at 966.974 kb on + strand, within BWI76_RS04640at 966.982 kb on - strand, within BWI76_RS04640at 966.988 kb on + strand, within BWI76_RS04640at 966.988 kb on + strand, within BWI76_RS04640at 966.988 kb on + strand, within BWI76_RS04640at 967.005 kb on - strand, within BWI76_RS04640at 967.026 kb on - strand, within BWI76_RS04640at 967.181 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.191 kb on + strand, within BWI76_RS04640at 967.194 kb on - strand, within BWI76_RS04640at 967.198 kb on + strand, within BWI76_RS04640at 967.198 kb on + strand, within BWI76_RS04640at 967.199 kb on - strand, within BWI76_RS04640at 967.199 kb on - strand, within BWI76_RS04640at 967.199 kb on - strand, within BWI76_RS04640at 967.199 kb on - strand, within BWI76_RS04640at 967.199 kb on - strand, within BWI76_RS04640at 967.199 kb on - strand, within BWI76_RS04640at 967.199 kb on - strand, within BWI76_RS04640at 967.199 kb on - strand, within BWI76_RS04640at 967.199 kb on - strand, within BWI76_RS04640at 967.199 kb on - strand, within BWI76_RS04640at 967.199 kb on - strand, within BWI76_RS04640at 967.199 kb on - strand, within BWI76_RS04640at 967.199 kb on - strand, within BWI76_RS04640at 967.218 kb on + strand, within BWI76_RS04640at 967.223 kb on + strand, within BWI76_RS04640at 967.311 kb on - strand, within BWI76_RS04640at 967.324 kb on + strand, within BWI76_RS04640at 967.332 kb on + strand, within BWI76_RS04640at 967.338 kb on + strand, within BWI76_RS04640at 967.338 kb on + strand, within BWI76_RS04640at 967.338 kb on + strand, within BWI76_RS04640at 967.338 kb on + strand, within BWI76_RS04640at 967.338 kb on + strand, within BWI76_RS04640at 967.338 kb on + strand, within BWI76_RS04640at 967.338 kb on + strand, within BWI76_RS04640at 967.338 kb on + strand, within BWI76_RS04640at 967.338 kb on + strand, within BWI76_RS04640at 967.338 kb on + strand, within BWI76_RS04640at 967.341 kb on - strandat 967.346 kb on - strand, within BWI76_RS04640at 967.346 kb on - strand, within BWI76_RS04640at 967.346 kb on - strand, within BWI76_RS04640at 967.346 kb on - strand, within BWI76_RS04640at 967.346 kb on - strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.368 kb on + strand, within BWI76_RS04640at 967.376 kb on - strand, within BWI76_RS04640at 967.376 kb on - strand, within BWI76_RS04640at 967.376 kb on - strand, within BWI76_RS04640at 967.376 kb on - strand, within BWI76_RS04640at 967.376 kb on - strand, within BWI76_RS04640at 967.376 kb on - strand, within BWI76_RS04640at 967.376 kb on - strand, within BWI76_RS04640at 967.376 kb on - strand, within BWI76_RS04640at 967.384 kb on - strand, within BWI76_RS04640at 967.399 kb on - strand, within BWI76_RS04640at 967.415 kb on + strand, within BWI76_RS04640at 967.447 kb on - strand, within BWI76_RS04640at 967.447 kb on - strand, within BWI76_RS04640at 967.483 kb on + strand, within BWI76_RS04640at 967.483 kb on + strand, within BWI76_RS04640at 967.483 kb on + strand, within BWI76_RS04640at 967.483 kb on + strand, within BWI76_RS04640at 967.483 kb on + strand, within BWI76_RS04640at 967.486 kb on - strand, within BWI76_RS04640at 967.488 kb on + strand, within BWI76_RS04640at 967.488 kb on + strand, within BWI76_RS04640at 967.491 kb on - strand, within BWI76_RS04640at 967.491 kb on - strand, within BWI76_RS04640at 967.496 kb on - strand, within BWI76_RS04640at 967.504 kb on + strand, within BWI76_RS04640at 967.509 kb on + strand, within BWI76_RS04640at 967.509 kb on + strand, within BWI76_RS04640at 967.509 kb on + strand, within BWI76_RS04640at 967.509 kb on + strand, within BWI76_RS04640at 967.512 kb on - strand, within BWI76_RS04640at 967.512 kb on - strand, within BWI76_RS04640at 967.514 kb on + strandat 967.514 kb on + strand, within BWI76_RS04640at 967.514 kb on + strand, within BWI76_RS04640at 967.514 kb on + strand, within BWI76_RS04640at 967.517 kb on - strand, within BWI76_RS04640at 967.517 kb on - strand, within BWI76_RS04640at 967.517 kb on - strand, within BWI76_RS04640at 967.517 kb on - strand, within BWI76_RS04640at 967.517 kb on - strand, within BWI76_RS04640at 967.519 kb on + strand, within BWI76_RS04640at 967.522 kb on - strand, within BWI76_RS04640at 967.571 kb on + strand, within BWI76_RS04640at 967.610 kb on + strand, within BWI76_RS04640at 967.633 kb on - strandat 967.644 kb on + strandat 967.716 kb on + strandat 967.719 kb on - strandat 967.719 kb on - strandat 967.719 kb on - strandat 967.725 kb on - strandat 967.802 kb on + strandat 967.817 kb on + strandat 967.954 kb on - strand, within BWI76_RS04645at 967.954 kb on - strand, within BWI76_RS04645at 967.993 kb on + strand, within BWI76_RS04645at 968.047 kb on - strand, within BWI76_RS04645at 968.083 kb on - strand, within BWI76_RS04645at 968.114 kb on - strand, within BWI76_RS04645at 968.154 kb on - strand, within BWI76_RS04645at 968.174 kb on + strand, within BWI76_RS04645at 968.333 kb on - strand, within BWI76_RS04645at 968.426 kb on + strandat 968.481 kb on - strandat 968.738 kb on + strand, within BWI76_RS04650at 968.770 kb on - strand, within BWI76_RS04650at 968.794 kb on - strand, within BWI76_RS04650at 968.818 kb on - strand, within BWI76_RS04650at 968.990 kb on - strand, within BWI76_RS04650at 969.100 kb on + strand, within BWI76_RS04650at 969.100 kb on + strand, within BWI76_RS04650at 969.108 kb on - strand, within BWI76_RS04650at 969.137 kb on - strand, within BWI76_RS04650at 969.272 kb on + strand, within BWI76_RS04650at 969.347 kb on - strand, within BWI76_RS04650at 969.347 kb on - strand, within BWI76_RS04650at 969.347 kb on - strand, within BWI76_RS04650at 969.352 kb on + strand, within BWI76_RS04650

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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966,748 - -1.6
966,843 + +0.9
966,843 + -0.3
966,851 - +0.9
966,851 - +0.1
966,851 - +0.2
966,855 + +0.4
966,861 + +0.1
966,863 - +0.2
966,863 - +0.5
966,872 + +0.7
966,873 - -0.6
966,897 + +1.1
966,898 + BWI76_RS04640 0.10 +0.5
966,931 + -1.3
966,950 + BWI76_RS04640 0.16 +0.1
966,951 - -0.7
966,958 - BWI76_RS04640 0.17 +0.3
966,974 + BWI76_RS04640 0.19 -0.3
966,974 + BWI76_RS04640 0.19 -0.2
966,974 + BWI76_RS04640 0.19 +1.9
966,982 - BWI76_RS04640 0.19 -0.9
966,988 + BWI76_RS04640 0.20 +0.7
966,988 + BWI76_RS04640 0.20 +0.3
966,988 + BWI76_RS04640 0.20 -0.1
967,005 - BWI76_RS04640 0.22 +1.1
967,026 - BWI76_RS04640 0.24 -0.9
967,181 + BWI76_RS04640 0.42 -0.6
967,191 + BWI76_RS04640 0.43 -0.6
967,191 + BWI76_RS04640 0.43 -0.1
967,191 + BWI76_RS04640 0.43 +0.1
967,191 + BWI76_RS04640 0.43 -2.0
967,191 + BWI76_RS04640 0.43 -0.1
967,191 + BWI76_RS04640 0.43 +1.7
967,191 + BWI76_RS04640 0.43 -0.9
967,191 + BWI76_RS04640 0.43 -0.6
967,191 + BWI76_RS04640 0.43 +1.2
967,191 + BWI76_RS04640 0.43 +1.1
967,191 + BWI76_RS04640 0.43 -0.4
967,191 + BWI76_RS04640 0.43 -0.0
967,191 + BWI76_RS04640 0.43 -0.8
967,191 + BWI76_RS04640 0.43 +0.7
967,191 + BWI76_RS04640 0.43 +0.0
967,191 + BWI76_RS04640 0.43 +0.9
967,191 + BWI76_RS04640 0.43 +1.6
967,191 + BWI76_RS04640 0.43 -0.9
967,191 + BWI76_RS04640 0.43 +0.8
967,191 + BWI76_RS04640 0.43 +1.1
967,191 + BWI76_RS04640 0.43 +0.1
967,191 + BWI76_RS04640 0.43 -2.2
967,191 + BWI76_RS04640 0.43 +0.5
967,191 + BWI76_RS04640 0.43 -0.6
967,191 + BWI76_RS04640 0.43 -0.3
967,191 + BWI76_RS04640 0.43 +0.5
967,191 + BWI76_RS04640 0.43 +0.6
967,191 + BWI76_RS04640 0.43 +0.1
967,194 - BWI76_RS04640 0.43 +1.4
967,198 + BWI76_RS04640 0.43 -0.6
967,198 + BWI76_RS04640 0.43 +2.1
967,199 - BWI76_RS04640 0.44 -0.5
967,199 - BWI76_RS04640 0.44 -0.3
967,199 - BWI76_RS04640 0.44 +0.3
967,199 - BWI76_RS04640 0.44 -0.7
967,199 - BWI76_RS04640 0.44 -0.7
967,199 - BWI76_RS04640 0.44 +2.2
967,199 - BWI76_RS04640 0.44 -0.4
967,199 - BWI76_RS04640 0.44 +1.8
967,199 - BWI76_RS04640 0.44 -0.3
967,199 - BWI76_RS04640 0.44 -0.8
967,199 - BWI76_RS04640 0.44 -2.3
967,199 - BWI76_RS04640 0.44 -0.9
967,199 - BWI76_RS04640 0.44 -0.9
967,218 + BWI76_RS04640 0.46 +0.8
967,223 + BWI76_RS04640 0.46 +0.7
967,311 - BWI76_RS04640 0.56 -0.4
967,324 + BWI76_RS04640 0.58 +0.8
967,332 + BWI76_RS04640 0.58 +1.6
967,338 + BWI76_RS04640 0.59 -1.6
967,338 + BWI76_RS04640 0.59 -1.6
967,338 + BWI76_RS04640 0.59 -0.9
967,338 + BWI76_RS04640 0.59 +0.2
967,338 + BWI76_RS04640 0.59 -0.4
967,338 + BWI76_RS04640 0.59 +0.7
967,338 + BWI76_RS04640 0.59 -1.3
967,338 + BWI76_RS04640 0.59 +0.8
967,338 + BWI76_RS04640 0.59 -0.3
967,338 + BWI76_RS04640 0.59 -1.8
967,341 - +1.1
967,346 - BWI76_RS04640 0.60 -0.3
967,346 - BWI76_RS04640 0.60 -1.8
967,346 - BWI76_RS04640 0.60 -1.6
967,346 - BWI76_RS04640 0.60 -0.3
967,346 - BWI76_RS04640 0.60 -0.4
967,368 + BWI76_RS04640 0.62 +0.0
967,368 + BWI76_RS04640 0.62 -0.9
967,368 + BWI76_RS04640 0.62 +0.3
967,368 + BWI76_RS04640 0.62 -0.2
967,368 + BWI76_RS04640 0.62 +1.6
967,368 + BWI76_RS04640 0.62 +0.7
967,368 + BWI76_RS04640 0.62 -0.1
967,368 + BWI76_RS04640 0.62 +0.9
967,368 + BWI76_RS04640 0.62 -0.9
967,368 + BWI76_RS04640 0.62 +1.4
967,368 + BWI76_RS04640 0.62 +0.3
967,368 + BWI76_RS04640 0.62 -0.2
967,368 + BWI76_RS04640 0.62 -1.4
967,368 + BWI76_RS04640 0.62 +0.1
967,368 + BWI76_RS04640 0.62 +1.4
967,368 + BWI76_RS04640 0.62 -1.4
967,368 + BWI76_RS04640 0.62 -0.7
967,376 - BWI76_RS04640 0.63 +0.5
967,376 - BWI76_RS04640 0.63 -2.0
967,376 - BWI76_RS04640 0.63 +0.8
967,376 - BWI76_RS04640 0.63 +1.5
967,376 - BWI76_RS04640 0.63 +0.6
967,376 - BWI76_RS04640 0.63 +1.1
967,376 - BWI76_RS04640 0.63 +0.5
967,376 - BWI76_RS04640 0.63 +0.1
967,384 - BWI76_RS04640 0.64 +1.3
967,399 - BWI76_RS04640 0.66 -0.3
967,415 + BWI76_RS04640 0.68 -0.1
967,447 - BWI76_RS04640 0.71 -0.3
967,447 - BWI76_RS04640 0.71 -2.1
967,483 + BWI76_RS04640 0.75 +0.1
967,483 + BWI76_RS04640 0.75 -1.7
967,483 + BWI76_RS04640 0.75 -0.5
967,483 + BWI76_RS04640 0.75 +0.5
967,483 + BWI76_RS04640 0.75 -1.5
967,486 - BWI76_RS04640 0.76 +0.1
967,488 + BWI76_RS04640 0.76 -1.9
967,488 + BWI76_RS04640 0.76 +0.0
967,491 - BWI76_RS04640 0.76 +0.0
967,491 - BWI76_RS04640 0.76 -0.3
967,496 - BWI76_RS04640 0.77 +1.4
967,504 + BWI76_RS04640 0.78 -1.8
967,509 + BWI76_RS04640 0.78 -0.6
967,509 + BWI76_RS04640 0.78 -0.2
967,509 + BWI76_RS04640 0.78 -0.2
967,509 + BWI76_RS04640 0.78 -1.0
967,512 - BWI76_RS04640 0.78 +0.1
967,512 - BWI76_RS04640 0.78 -0.9
967,514 + +1.1
967,514 + BWI76_RS04640 0.79 -1.1
967,514 + BWI76_RS04640 0.79 +0.9
967,514 + BWI76_RS04640 0.79 +0.7
967,517 - BWI76_RS04640 0.79 +0.9
967,517 - BWI76_RS04640 0.79 -0.1
967,517 - BWI76_RS04640 0.79 +1.3
967,517 - BWI76_RS04640 0.79 +0.7
967,517 - BWI76_RS04640 0.79 -0.2
967,519 + BWI76_RS04640 0.79 +0.6
967,522 - BWI76_RS04640 0.80 -2.7
967,571 + BWI76_RS04640 0.85 +0.2
967,610 + BWI76_RS04640 0.89 -0.3
967,633 - +2.1
967,644 + -0.2
967,716 + +0.9
967,719 - -0.2
967,719 - +1.5
967,719 - -1.1
967,725 - -1.9
967,802 + -0.7
967,817 + +0.5
967,954 - BWI76_RS04645 0.28 -3.2
967,954 - BWI76_RS04645 0.28 -3.8
967,993 + BWI76_RS04645 0.33 -0.8
968,047 - BWI76_RS04645 0.40 -4.9
968,083 - BWI76_RS04645 0.45 -4.6
968,114 - BWI76_RS04645 0.49 -3.5
968,154 - BWI76_RS04645 0.54 -3.4
968,174 + BWI76_RS04645 0.57 -3.9
968,333 - BWI76_RS04645 0.78 -3.8
968,426 + -2.1
968,481 - -5.0
968,738 + BWI76_RS04650 0.17 +0.4
968,770 - BWI76_RS04650 0.20 -1.1
968,794 - BWI76_RS04650 0.22 -2.5
968,818 - BWI76_RS04650 0.24 -0.3
968,990 - BWI76_RS04650 0.38 +0.9
969,100 + BWI76_RS04650 0.47 +2.6
969,100 + BWI76_RS04650 0.47 +0.7
969,108 - BWI76_RS04650 0.47 -0.1
969,137 - BWI76_RS04650 0.50 +0.4
969,272 + BWI76_RS04650 0.61 -0.0
969,347 - BWI76_RS04650 0.67 +0.5
969,347 - BWI76_RS04650 0.67 -0.5
969,347 - BWI76_RS04650 0.67 -1.8
969,352 + BWI76_RS04650 0.68 -0.1

Or see this region's nucleotide sequence