Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS21170

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
2,420,600	-				-0.1
2,420,634	-		BBR_RS20480	0.11	-1.0
2,421,470	-				-2.1
2,421,482	-				-1.9
2,421,497	-				-1.0
2,421,521	-				-1.4
2,421,551	-				-0.3
2,421,551	-				-1.0
2,421,551	-				-1.2
2,421,551	-				-1.9
2,421,551	-				-0.3
2,421,551	-				-1.0
2,421,551	-				-0.5
2,421,551	-				-1.4
2,421,551	-				-1.2
2,421,551	-				-0.3
2,421,551	-				-1.2
2,421,551	-				-0.5
2,421,572	-		BBR_RS21170	0.14	-1.1
2,421,577	-		BBR_RS21170	0.15	+0.3
2,421,577	-		BBR_RS21170	0.15	-0.8
2,421,585	-		BBR_RS21170	0.18	-2.0
2,421,587	-		BBR_RS21170	0.18	-3.0
2,421,587	-		BBR_RS21170	0.18	-0.4
2,421,587	-		BBR_RS21170	0.18	-1.7
2,421,587	-		BBR_RS21170	0.18	-2.1
2,421,595	-		BBR_RS21170	0.21	-1.0
2,421,595	-		BBR_RS21170	0.21	-1.9
2,421,630	-		BBR_RS21170	0.32	-2.0
2,421,644	-		BBR_RS21170	0.36	-1.6
2,421,644	-		BBR_RS21170	0.36	-1.2
2,421,660	-		BBR_RS21170	0.41	-1.3
2,421,660	-		BBR_RS21170	0.41	-3.2
2,421,660	-		BBR_RS21170	0.41	-0.3
2,421,660	-		BBR_RS21170	0.41	-1.5
2,421,693	-		BBR_RS21170	0.52	-2.0
2,421,699	-		BBR_RS21170	0.53	+0.4
2,421,699	-		BBR_RS21170	0.53	+0.1
2,421,699	-		BBR_RS21170	0.53	-2.1
2,421,699	-		BBR_RS21170	0.53	-1.9
2,421,699	-		BBR_RS21170	0.53	-2.0
2,421,715	-		BBR_RS21170	0.58	-1.5
2,421,715	-		BBR_RS21170	0.58	-1.9
2,421,715	-		BBR_RS21170	0.58	-0.2
2,421,715	-		BBR_RS21170	0.58	-1.7
2,421,746	-		BBR_RS21170	0.68	-1.0
2,421,760	-		BBR_RS21170	0.73	-1.8
2,421,767	-		BBR_RS21170	0.75	-2.5
2,421,796	-		BBR_RS21170	0.84	-0.8
2,421,806	-		BBR_RS21170	0.87	-2.2
2,421,807	-		BBR_RS21170	0.87	-1.2
2,421,813	-		BBR_RS21170	0.89	-1.4
2,421,825	-				-1.7
2,421,835	-				-2.5
2,421,835	-				-2.1
2,421,840	-				-2.6
2,421,840	-				-2.1
2,421,840	-				-2.6
2,421,844	-				-1.3
2,421,845	-				-0.8
2,422,192	-				-1.9
2,422,192	-				-1.5
2,422,201	-				-1.1
2,422,209	+				+0.9
2,422,244	+				-0.1
2,422,443	+				-2.4
2,422,443	+				-0.7
2,422,490	+				+0.4
2,422,522	-				+0.4
2,422,523	+				+0.1
2,422,523	+				+0.3
2,422,544	+				-0.0