Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS20920

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
1,290,643	-				-1.0
1,290,643	-				-0.1
1,290,677	-				-1.2
1,290,709	+		BBR_RS20920	0.12	-0.3
1,290,710	+		BBR_RS20920	0.12	-2.1
1,290,715	+		BBR_RS20920	0.14	-1.0
1,290,715	+		BBR_RS20920	0.14	-0.0
1,290,723	-		BBR_RS20920	0.16	+0.1
1,290,723	-		BBR_RS20920	0.16	-1.6
1,290,729	+		BBR_RS20920	0.18	-1.8
1,290,763	+		BBR_RS20920	0.29	-1.2
1,290,775	+		BBR_RS20920	0.33	-0.9
1,290,861	-		BBR_RS20920	0.62	-1.3
1,290,965	+				-0.3
1,290,972	+				-0.5
1,290,992	-		BBR_RS15695	0.12	-0.3
1,291,041	+		BBR_RS15695	0.18	-1.9
1,291,041	+		BBR_RS15695	0.18	-0.4
1,291,041	+		BBR_RS15695	0.18	-0.5
1,291,041	+		BBR_RS15695	0.18	-1.2
1,291,041	+		BBR_RS15695	0.18	+0.0
1,291,041	+		BBR_RS15695	0.18	+0.8
1,291,041	+		BBR_RS15695	0.18	-0.5
1,291,127	-		BBR_RS15695	0.27	+1.3
1,291,127	-		BBR_RS15695	0.27	+0.3
1,291,198	-		BBR_RS15695	0.34	-0.7
1,291,250	+		BBR_RS15695	0.40	-0.2
1,291,258	-		BBR_RS15695	0.41	-1.8
1,291,373	-		BBR_RS15695	0.53	+0.4
1,291,379	-		BBR_RS15695	0.54	-1.5
1,291,446	+		BBR_RS15695	0.61	+0.7
1,291,510	-		BBR_RS15695	0.68	-0.9
1,291,561	-		BBR_RS15695	0.73	+2.0
1,291,561	-		BBR_RS15695	0.73	-0.2
1,291,658	+		BBR_RS15695	0.83	+0.8
1,291,658	+		BBR_RS15695	0.83	+0.4
1,291,677	+		BBR_RS15695	0.85	-0.3
1,291,682	+		BBR_RS15695	0.86	-0.3
1,291,697	+		BBR_RS15695	0.88	-0.4
1,291,710	-		BBR_RS15695	0.89	-0.2
1,291,720	-				-0.4
1,291,727	-				+0.1
1,291,735	-				-1.1
1,291,763	-				-2.2
1,291,791	-				-0.2
1,291,872	+				+0.7