Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS20440

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
2,408,281	-				+0.3
2,408,306	+				-0.6
2,408,311	+				-0.4
2,408,311	+				+0.1
2,408,311	+				+0.2
2,408,311	+				+0.1
2,408,311	+				+0.0
2,408,311	+				-0.9
2,408,311	+				-0.3
2,408,311	+				-0.7
2,408,319	-				-0.3
2,408,319	-				-0.6
2,408,319	-				+0.4
2,408,319	-				-0.2
2,408,319	-				-0.2
2,408,319	-				-0.5
2,408,319	-				-0.3
2,408,319	-				-0.9
2,408,319	-				-0.7
2,408,319	-				-0.2
2,408,320	+				-0.4
2,408,320	+				+0.3
2,408,328	-				+1.3
2,408,332	+				-0.3
2,408,332	+				+0.0
2,408,332	+				+0.5
2,408,332	+				+0.3
2,408,332	+				-0.2
2,408,332	+				+0.1
2,408,332	+				+0.8
2,408,332	+				-0.2
2,408,332	+				+0.1
2,408,337	+				-2.1
2,408,340	-				+0.2
2,408,340	-				+0.1
2,408,340	-				+0.1
2,408,340	-				-0.3
2,408,340	-				+0.3
2,408,340	-				-0.0
2,408,340	-				-0.9
2,408,340	-				-0.4
2,408,340	-				-0.1
2,408,345	-				+0.5
2,408,364	+				+0.6
2,408,364	+				-1.0
2,408,430	+				-1.0
2,408,430	+				-0.5
2,408,430	+				+1.0
2,408,430	+				-0.6
2,408,430	+				-0.2
2,408,430	+				-0.7
2,408,430	+				-0.2
2,408,430	+				-0.6
2,408,430	+				-1.0
2,408,433	+				-1.0
2,408,475	+		BBR_RS20440	0.13	+2.4
2,408,485	+		BBR_RS20440	0.14	-0.4
2,408,485	+		BBR_RS20440	0.14	-1.3
2,408,485	+		BBR_RS20440	0.14	-0.6
2,408,485	+		BBR_RS20440	0.14	-0.8
2,408,493	+		BBR_RS20440	0.14	-1.5
2,408,521	+		BBR_RS20440	0.17	+0.2
2,408,533	+		BBR_RS20440	0.19	-0.0
2,408,533	+		BBR_RS20440	0.19	+1.5
2,408,635	+		BBR_RS20440	0.29	-2.5
2,408,691	+		BBR_RS20440	0.35	-0.6
2,408,736	+		BBR_RS20440	0.39	+0.1
2,408,736	+		BBR_RS20440	0.39	-0.3
2,408,737	+		BBR_RS20440	0.40	-1.8
2,408,786	+		BBR_RS20440	0.45	-0.3
2,408,801	+		BBR_RS20440	0.46	+0.9
2,408,808	+		BBR_RS20440	0.47	-1.0
2,408,957	+		BBR_RS20440	0.62	-1.7
2,408,977	+		BBR_RS20440	0.64	+2.5
2,408,991	+		BBR_RS20440	0.66	+0.2
2,408,991	+		BBR_RS20440	0.66	-0.3
2,409,039	+		BBR_RS20440	0.71	-0.1
2,409,046	+		BBR_RS20440	0.71	-0.7
2,409,074	+		BBR_RS20440	0.74	-2.7
2,409,132	+		BBR_RS20440	0.80	-0.4
2,409,142	+		BBR_RS20440	0.81	+1.5
2,409,154	+		BBR_RS20440	0.82	+2.5
2,409,246	-				+1.5
2,409,260	+				+0.5
2,409,260	+				-0.7
2,409,260	+				+0.5
2,409,260	+				-1.0
2,409,293	-				+1.5
2,409,293	-				+1.5
2,409,298	+				-0.5
2,409,336	+				-1.1
2,409,336	+				-0.8
2,409,357	+				-0.8