Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS18690

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
1,981,021	+				-0.1
1,981,026	+				+0.7
1,981,029	-				+0.1
1,981,119	+				+0.3
1,981,133	-				-0.7
1,981,133	-				-0.2
1,981,160	-				-1.2
1,981,163	+				+0.4
1,981,184	-				-0.1
1,981,366	-		BBR_RS18690	0.13	+0.8
1,981,394	-		BBR_RS18690	0.16	-0.4
1,981,467	+		BBR_RS18690	0.22	-0.6
1,981,467	+		BBR_RS18690	0.22	-0.0
1,981,478	+		BBR_RS18690	0.23	-1.3
1,981,478	+		BBR_RS18690	0.23	-2.8
1,981,506	+		BBR_RS18690	0.25	-0.0
1,981,516	+		BBR_RS18690	0.26	+0.0
1,981,524	-		BBR_RS18690	0.27	+0.4
1,981,593	+		BBR_RS18690	0.32	+0.6
1,981,593	+		BBR_RS18690	0.32	-1.5
1,981,606	-		BBR_RS18690	0.34	-2.3
1,981,671	+		BBR_RS18690	0.39	-0.6
1,981,678	-		BBR_RS18690	0.40	-2.3
1,981,679	-		BBR_RS18690	0.40	+1.8
1,981,707	+		BBR_RS18690	0.42	-0.7
1,981,823	+		BBR_RS18690	0.52	-1.5
1,981,924	+		BBR_RS18690	0.60	-2.4
1,981,924	+		BBR_RS18690	0.60	+1.4
1,981,927	+		BBR_RS18690	0.61	-0.6
1,981,929	+		BBR_RS18690	0.61	-1.9
1,981,932	-		BBR_RS18690	0.61	+0.3
1,982,077	+		BBR_RS18690	0.73	-1.6
1,982,085	-		BBR_RS18690	0.74	-0.4
1,982,130	-		BBR_RS18690	0.78	-2.1
1,982,135	-		BBR_RS18690	0.78	-1.7
1,982,165	+		BBR_RS18690	0.81	-0.5
1,982,165	+		BBR_RS18690	0.81	+0.6
1,982,166	+		BBR_RS18690	0.81	-0.8
1,982,166	+		BBR_RS18690	0.81	-0.7
1,982,172	+		BBR_RS18690	0.81	-2.0
1,982,174	-		BBR_RS18690	0.82	-1.2
1,982,210	+		BBR_RS18690	0.85	-2.5
1,982,210	+		BBR_RS18690	0.85	-1.0
1,982,212	-		BBR_RS18690	0.85	-0.4
1,982,216	+		BBR_RS18690	0.85	-0.2
1,982,218	-		BBR_RS18690	0.85	-2.6
1,982,263	-		BBR_RS18690	0.89	+0.3
1,982,309	+				+0.3
1,982,317	-				+0.1
1,982,317	-				+0.6
1,982,331	+				-0.4
1,982,336	+				+0.5
1,982,452	+				-4.1
1,982,589	-		BBR_RS18695	0.22	-3.5
1,982,615	+		BBR_RS18695	0.25	-1.8
1,982,623	-		BBR_RS18695	0.26	-2.6
1,982,828	+		BBR_RS18695	0.49	-3.1
1,982,838	+		BBR_RS18695	0.50	-3.3
1,982,882	+		BBR_RS18695	0.55	-2.6
1,982,911	-		BBR_RS18695	0.58	-1.8
1,982,981	-		BBR_RS18695	0.66	-1.8
1,983,030	+		BBR_RS18695	0.71	-1.3
1,983,130	+		BBR_RS18695	0.83	-2.9
1,983,131	-		BBR_RS18695	0.83	-1.9
1,983,138	-		BBR_RS18695	0.83	-1.2
1,983,143	-		BBR_RS18695	0.84	-1.3
1,983,191	+		BBR_RS18695	0.89	-3.4
1,983,327	-				-0.1
1,983,327	-				-0.3
1,983,335	-				+0.4
1,983,338	-				+0.2
1,983,357	-				-0.3