Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS18170

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
1,861,244	+		BBR_RS18165	0.48	+0.3
1,862,125	-				-0.5
1,862,150	-				+0.2
1,862,150	-				-0.1
1,862,247	-				-1.5
1,862,333	-		BBR_RS18170	0.16	-0.1
1,862,371	-		BBR_RS18170	0.20	-0.5
1,862,371	-		BBR_RS18170	0.20	+0.2
1,862,514	+		BBR_RS18170	0.37	+0.6
1,862,810	-		BBR_RS18170	0.70	-1.6
1,862,970	-		BBR_RS18170	0.89	-0.5
1,863,093	+				-0.4
1,863,098	-				+0.2
1,863,108	+				+0.2
1,863,116	-				-0.2
1,863,116	-				-0.3
1,863,116	-				+0.5
1,863,122	-				+0.7
1,863,126	-				+0.0
1,863,127	-				-0.3
1,863,198	+				+0.5
1,863,211	-				-0.4
1,863,211	-				+0.1
1,863,220	+				+0.6
1,863,228	-				-0.8
1,863,236	-				-0.8
1,863,251	+				+0.5
1,863,310	+				+1.3
1,863,464	-		BBR_RS18175	0.32	+0.7
1,863,489	-		BBR_RS18175	0.36	+0.4
1,863,975	+				-0.7
1,864,012	-				+0.4
1,864,068	+				-1.8