Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS18045

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
1,838,747	+				-0.7
1,838,764	-				-0.0
1,838,764	-				-1.0
1,838,807	-				+0.3
1,838,818	-				-2.5
1,838,818	-				-0.2
1,838,882	-				-0.5
1,838,987	-		BBR_RS18045	0.15	-0.6
1,840,061	-				-0.2
1,840,074	-				+0.1
1,840,082	-				+0.6
1,840,146	-		BBR_RS18050	0.14	-1.3
1,840,173	-		BBR_RS18050	0.18	-1.3
1,840,293	-		BBR_RS18050	0.36	-1.4
1,840,326	-		BBR_RS18050	0.41	-0.1
1,840,489	-		BBR_RS18050	0.64	-0.0
1,840,542	-		BBR_RS18050	0.72	+0.3
1,840,542	-		BBR_RS18050	0.72	-1.3
1,840,634	-		BBR_RS18050	0.85	+0.6
1,840,707	+				-0.2
1,840,717	+				-0.1
1,840,725	-				-0.1
1,840,771	-				+1.0
1,840,795	-				+0.4
1,840,801	+				-0.8
1,840,801	+				-0.8
1,840,801	+				-0.3
1,840,809	-				+0.6
1,840,809	-				-1.0
1,840,851	-				+0.0
1,840,853	+				-0.3
1,840,861	-				+0.1
1,840,861	-				-0.4
1,840,877	+				-0.8
1,840,879	+				-0.3
1,840,927	+				+0.9
1,840,964	-		BBR_RS18055	0.14	-0.0
1,840,979	-		BBR_RS18055	0.16	-0.1
1,840,984	-		BBR_RS18055	0.16	+0.2
1,840,984	-		BBR_RS18055	0.16	-1.1
1,841,005	-		BBR_RS18055	0.19	-0.5