Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS17555

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
1,716,490	+		BBR_RS17550	0.33	-0.1
1,716,513	-		BBR_RS17550	0.35	+0.0
1,716,543	-		BBR_RS17550	0.37	+0.5
1,716,546	+		BBR_RS17550	0.37	-0.2
1,716,548	+		BBR_RS17550	0.37	-0.3
1,716,578	+		BBR_RS17550	0.39	+1.5
1,716,578	+		BBR_RS17550	0.39	-0.9
1,716,645	-		BBR_RS17550	0.44	-0.1
1,716,701	-		BBR_RS17550	0.48	+0.3
1,716,719	+		BBR_RS17550	0.49	+0.3
1,716,736	-		BBR_RS17550	0.50	-0.6
1,716,742	-		BBR_RS17550	0.50	-0.6
1,716,742	-		BBR_RS17550	0.50	+0.2
1,716,747	-		BBR_RS17550	0.51	+0.4
1,716,757	-		BBR_RS17550	0.51	+0.8
1,716,757	-		BBR_RS17550	0.51	+0.6
1,716,757	-		BBR_RS17550	0.51	-0.4
1,716,761	-		BBR_RS17550	0.52	-0.2
1,716,834	+		BBR_RS17550	0.57	+0.0
1,716,845	+		BBR_RS17550	0.57	-0.1
1,716,845	+		BBR_RS17550	0.57	+0.2
1,716,874	-		BBR_RS17550	0.59	-0.2
1,716,927	+		BBR_RS17550	0.63	-0.2
1,716,943	+		BBR_RS17550	0.64	+0.8
1,716,952	+		BBR_RS17550	0.65	-1.1
1,716,960	-		BBR_RS17550	0.65	+1.1
1,716,968	-		BBR_RS17550	0.66	-0.1
1,717,006	-		BBR_RS17550	0.68	+2.0
1,717,043	-		BBR_RS17550	0.71	-0.7
1,717,094	-		BBR_RS17550	0.74	-0.5
1,717,114	-		BBR_RS17550	0.75	+0.6
1,717,150	+		BBR_RS17550	0.78	+0.4
1,717,179	+		BBR_RS17550	0.80	-0.1
1,717,180	+		BBR_RS17550	0.80	-1.0
1,717,188	-		BBR_RS17550	0.80	+0.1
1,717,259	-		BBR_RS17550	0.85	+0.5
1,717,260	-		BBR_RS17550	0.85	-0.4
1,717,268	+		BBR_RS17550	0.86	+0.3
1,717,281	-		BBR_RS17550	0.87	-0.8
1,717,282	-		BBR_RS17550	0.87	+0.3
1,717,313	-		BBR_RS17550	0.89	+0.1
1,717,355	-				+0.1
1,717,366	-				+0.1
1,717,440	+				-1.0
1,717,478	-				-0.2
1,717,617	-		BBR_RS17555	0.70	-0.2
1,717,625	-		BBR_RS17555	0.74	-0.5
1,717,641	+		BBR_RS17555	0.82	-0.4
1,717,648	+		BBR_RS17555	0.85	-0.9
1,717,722	-				+0.1
1,717,766	+				+0.1
1,717,766	+				+0.4
1,717,766	+				-0.1
1,717,774	-				-0.9
1,717,774	-				-0.5
1,717,774	-				-0.3
1,717,774	-				-0.8
1,717,784	-				+0.1
1,717,808	+				+0.3
1,717,811	-				-0.6
1,717,822	-				+0.7