Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS16950
Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v |
---|---|---|---|---|---|
remove | |||||
1,575,839 | - | -0.9 | |||
1,575,899 | - | +0.8 | |||
1,575,916 | - | BBR_RS16950 | 0.15 | -0.6 | |
1,576,148 | - | BBR_RS16950 | 0.87 | -1.8 | |
1,576,191 | + | +1.7 | |||
1,576,263 | - | -0.5 | |||
1,576,275 | - | -0.0 | |||
1,576,307 | - | +3.9 | |||
1,576,328 | - | +0.8 | |||
1,576,519 | - | BBR_RS16955 | 0.19 | -1.6 | |
1,576,640 | - | BBR_RS16955 | 0.30 | +0.5 | |
1,576,682 | - | BBR_RS16955 | 0.34 | -0.5 | |
1,577,053 | - | BBR_RS16955 | 0.69 | +0.3 | |
1,577,161 | - | BBR_RS16955 | 0.80 | -0.3 | |
1,577,169 | - | BBR_RS16955 | 0.80 | -1.1 |
Or see this region's nucleotide sequence