Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS16940

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
1,573,132	-				+0.4
1,573,132	-				-0.8
1,573,132	-				-1.9
1,573,140	-				-0.5
1,573,142	-				-1.1
1,573,142	-				-0.8
1,573,144	+				-1.3
1,573,144	+				-1.5
1,573,165	-				+1.0
1,573,278	+		BBR_RS16940	0.11	-0.9
1,573,278	+		BBR_RS16940	0.11	-2.2
1,573,286	-		BBR_RS16940	0.12	-0.9
1,573,435	+		BBR_RS16940	0.29	-1.4
1,573,443	-		BBR_RS16940	0.30	+0.0
1,573,443	-		BBR_RS16940	0.30	-1.7
1,573,832	-		BBR_RS16940	0.75	+0.3
1,574,063	-				-0.4
1,574,064	-				-2.4