Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS16430

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
1,441,542	+		BBR_RS16425	0.25	-0.3
1,441,598	+		BBR_RS16425	0.30	-0.2
1,441,779	+		BBR_RS16425	0.47	-0.0
1,441,799	+		BBR_RS16425	0.49	-1.0
1,441,824	-		BBR_RS16425	0.51	-2.6
1,441,828	-		BBR_RS16425	0.52	+0.7
1,441,988	-		BBR_RS16425	0.67	+0.7
1,442,254	-				-0.8
1,442,369	-				+0.2
1,442,552	-				-0.0
1,442,710	-		BBR_RS16430	0.21	-0.8
1,442,832	-		BBR_RS16430	0.30	-0.3
1,442,869	-		BBR_RS16430	0.33	+0.3
1,442,993	-		BBR_RS16430	0.43	-3.0
1,443,088	+		BBR_RS16430	0.50	+1.1
1,443,130	-		BBR_RS16430	0.54	-0.1
1,443,518	+		BBR_RS16430	0.84	+0.6
1,443,561	-		BBR_RS16430	0.88	-0.4
1,443,636	+				-0.3
1,443,651	-				-2.6
1,443,651	-				-0.0
1,443,672	-				+0.7
1,443,731	-				-0.1
1,443,796	-				-0.1
1,443,840	-				+0.5
1,443,841	+				-0.0
1,443,852	+				+0.4
1,443,852	+				+0.3
1,443,912	+				-0.3
1,443,912	+				+0.5
1,443,920	-				+0.1