Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS15085

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
1,151,833	+		BBR_RS15080	0.43	-1.7
1,151,841	-		BBR_RS15080	0.44	-1.3
1,151,843	+		BBR_RS15080	0.44	-1.0
1,152,090	+		BBR_RS15080	0.65	-1.6
1,152,275	+		BBR_RS15080	0.80	-0.3
1,152,353	+		BBR_RS15080	0.87	-1.8
1,152,369	-		BBR_RS15080	0.88	-1.4
1,152,416	-				-1.7
1,152,464	+				-2.6
1,152,464	+				-1.1
1,152,464	+				-0.8
1,152,522	+				-1.5
1,152,523	-				+0.9
1,152,530	+				-0.6
1,152,530	+				+0.5
1,152,538	-				+0.0
1,152,859	+		BBR_RS15085	0.20	-1.0
1,152,993	+		BBR_RS15085	0.28	-1.0
1,153,016	-		BBR_RS15085	0.29	-0.3
1,154,191	+				+0.3
1,154,193	+				+0.7
1,154,201	-				+0.6
1,154,219	-				-0.4
1,154,228	-				-0.3
1,154,229	-				+0.3
1,154,239	+				-0.3
1,154,273	-				-0.6
1,154,292	-				+0.2
1,154,521	+		BBR_RS15090	0.46	-0.5
1,154,706	+		BBR_RS15090	0.87	-0.7