Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS15080

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
1,150,361	-		BBR_RS15070	0.72	-0.2
1,150,386	+		BBR_RS15070	0.74	-1.8
1,150,482	+		BBR_RS15070	0.82	-0.8
1,150,600	+				+0.2
1,150,690	+				-0.3
1,150,698	+				+0.7
1,150,716	+				+1.0
1,150,716	+				+0.1
1,150,719	-				-0.2
1,150,726	+				-0.3
1,150,747	-				-0.4
1,150,755	+				-0.6
1,150,764	-				-0.6
1,150,765	-				-0.5
1,150,790	-				+0.3
1,150,896	+		BBR_RS15075	0.21	-0.5
1,150,904	-		BBR_RS15075	0.22	+0.2
1,150,928	+		BBR_RS15075	0.27	+0.1
1,150,940	+		BBR_RS15075	0.30	-0.5
1,150,948	-		BBR_RS15075	0.32	+0.4
1,150,972	-		BBR_RS15075	0.37	-0.6
1,150,972	-		BBR_RS15075	0.37	+0.4
1,150,996	+		BBR_RS15075	0.42	-0.2
1,151,067	+		BBR_RS15075	0.57	+0.1
1,151,085	-		BBR_RS15075	0.61	-0.5
1,151,085	-		BBR_RS15075	0.61	-0.0
1,151,094	-		BBR_RS15075	0.62	+0.0
1,151,095	-		BBR_RS15075	0.63	+1.0
1,151,097	-		BBR_RS15075	0.63	-1.4
1,151,101	+		BBR_RS15075	0.64	+0.2
1,151,107	-		BBR_RS15075	0.65	-0.2
1,151,107	-		BBR_RS15075	0.65	-0.1
1,151,107	-		BBR_RS15075	0.65	+0.2
1,151,107	-		BBR_RS15075	0.65	+0.4
1,151,133	+		BBR_RS15075	0.71	+0.7
1,151,187	-		BBR_RS15075	0.82	+0.7
1,151,193	+		BBR_RS15075	0.83	-0.5
1,151,193	+		BBR_RS15075	0.83	-1.1
1,151,206	-		BBR_RS15075	0.86	-0.1
1,151,229	-				-0.0
1,151,229	-				+0.1
1,151,234	-				+0.4
1,151,234	-				+0.3
1,151,234	-				+0.2
1,151,262	-				-0.1
1,151,279	+				-0.8
1,151,435	+				-1.4
1,151,833	+		BBR_RS15080	0.43	-1.7
1,151,841	-		BBR_RS15080	0.44	-1.3
1,151,843	+		BBR_RS15080	0.44	-1.0
1,152,090	+		BBR_RS15080	0.65	-1.6
1,152,275	+		BBR_RS15080	0.80	-0.3
1,152,353	+		BBR_RS15080	0.87	-1.8
1,152,369	-		BBR_RS15080	0.88	-1.4
1,152,416	-				-1.7
1,152,464	+				-2.6
1,152,464	+				-1.1
1,152,464	+				-0.8
1,152,522	+				-1.5
1,152,523	-				+0.9
1,152,530	+				-0.6
1,152,530	+				+0.5
1,152,538	-				+0.0
1,152,859	+		BBR_RS15085	0.20	-1.0
1,152,993	+		BBR_RS15085	0.28	-1.0
1,153,016	-		BBR_RS15085	0.29	-0.3