Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS15050

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
1,144,793	-				+0.2
1,144,793	-				+0.4
1,144,872	-				+0.7
1,144,924	-				+0.5
1,144,929	-				-0.4
1,144,945	-		BBR_RS15045	0.12	-0.6
1,144,971	+		BBR_RS15045	0.16	+0.0
1,144,992	+		BBR_RS15045	0.19	+0.0
1,145,001	+		BBR_RS15045	0.20	+0.2
1,145,115	+		BBR_RS15045	0.37	-0.0
1,145,155	+		BBR_RS15045	0.43	-0.1
1,145,155	-		BBR_RS15045	0.43	+0.3
1,145,171	+		BBR_RS15045	0.45	+0.3
1,145,171	+		BBR_RS15045	0.45	-1.1
1,145,171	+		BBR_RS15045	0.45	-1.1
1,145,171	+		BBR_RS15045	0.45	+0.3
1,145,192	-		BBR_RS15045	0.48	+0.4
1,145,200	+		BBR_RS15045	0.49	-0.4
1,145,207	+		BBR_RS15045	0.51	+0.7
1,145,336	-		BBR_RS15045	0.70	+0.0
1,145,365	+		BBR_RS15045	0.74	+0.3
1,145,407	+		BBR_RS15045	0.80	-0.0
1,145,434	+		BBR_RS15045	0.84	-0.7
1,145,434	+		BBR_RS15045	0.84	+0.6
1,145,434	+		BBR_RS15045	0.84	+0.1
1,145,434	+		BBR_RS15045	0.84	+0.4
1,145,434	+		BBR_RS15045	0.84	+0.8
1,145,442	-		BBR_RS15045	0.85	-0.3
1,145,457	+		BBR_RS15045	0.88	+0.4
1,145,464	-		BBR_RS15045	0.89	+0.9
1,145,481	-				+1.1
1,145,483	-				+0.5
1,145,483	-				-0.3
1,145,492	+				+0.0
1,145,548	-				-0.1
1,145,567	+				+0.0
1,145,585	+				-0.1
1,145,588	-				-0.1
1,145,588	-				-0.2
1,145,588	-				+0.3
1,145,599	+				+0.4
1,145,750	+		BBR_RS15050	0.31	-0.8
1,145,771	+		BBR_RS15050	0.37	-0.7
1,145,938	+		BBR_RS15050	0.78	-0.1
1,145,953	+		BBR_RS15050	0.81	-0.8
1,146,038	+				-1.7
1,146,052	+		BBR_RS15055	0.11	-1.2
1,146,085	+		BBR_RS15055	0.24	-1.1
1,146,090	+		BBR_RS15055	0.27	+0.0
1,146,183	+		BBR_RS15055	0.66	-0.5
1,146,218	+		BBR_RS15055	0.81	-0.3
1,146,239	+		BBR_RS15055	0.89	-0.8
1,146,274	+				-1.6