Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS14700

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
1,072,442	+				+0.4
1,072,445	-				+0.2
1,072,445	-				-0.1
1,072,445	-				+0.3
1,072,445	-				+0.3
1,072,449	+				+1.2
1,072,452	-				-0.5
1,072,485	+				+0.4
1,072,611	-				+0.2
1,072,611	-				-0.6
1,072,632	-				+0.1
1,072,686	-		BBR_RS20845	0.13	+0.3
1,072,730	-		BBR_RS20845	0.20	-0.2
1,072,810	-		BBR_RS20845	0.33	+0.2
1,072,846	-		BBR_RS20845	0.39	+0.9
1,072,874	+		BBR_RS20845	0.43	-0.2
1,072,874	+		BBR_RS20845	0.43	-0.5
1,072,882	-		BBR_RS20845	0.45	+0.8
1,072,921	+		BBR_RS20845	0.51	+0.0
1,072,966	-		BBR_RS20845	0.58	+0.4
1,072,968	+		BBR_RS20845	0.59	+0.1
1,072,969	-		BBR_RS20845	0.59	+2.3
1,072,971	-		BBR_RS20845	0.59	+0.4
1,072,981	-		BBR_RS20845	0.61	-0.2
1,072,998	-		BBR_RS20845	0.64	+0.7
1,073,000	+		BBR_RS20845	0.64	-0.2
1,073,003	-		BBR_RS20845	0.64	+0.0
1,073,020	+		BBR_RS20845	0.67	+0.2
1,073,035	-		BBR_RS20845	0.70	+0.1
1,073,079	-		BBR_RS20845	0.77	+0.5
1,073,135	+		BBR_RS20845	0.86	+0.5
1,073,135	+		BBR_RS20845	0.86	+0.6
1,073,141	-		BBR_RS20845	0.87	+0.5
1,073,172	-				+0.1
1,073,172	-				+1.0
1,073,182	+				+0.5
1,073,243	+				+0.6
1,073,252	-				+1.1
1,073,270	-				+0.1
1,073,280	-				-1.2
1,073,306	-				+0.5
1,073,347	-				+0.3
1,073,363	-				+1.2
1,073,379	+				-0.9
1,073,379	+				+0.3
1,073,386	-				+0.4
1,073,389	+				+0.4
1,073,408	-				+0.7
1,073,436	+				+1.1
1,073,441	+				+0.6
1,073,544	+		BBR_RS14700	0.33	-1.5
1,073,669	-		BBR_RS14700	0.71	+0.4
1,073,679	+		BBR_RS14700	0.74	-0.0
1,073,687	-		BBR_RS14700	0.77	-1.2
1,073,693	+		BBR_RS14700	0.79	-1.1
1,073,747	-				-0.2
1,073,768	+				+0.2
1,073,769	+				+1.1
1,074,044	+				-0.1
1,074,084	+				-0.2
1,074,084	+				+0.3
1,074,084	+				+0.1
1,074,084	+				+1.9
1,074,084	+				-1.0
1,074,089	+				-0.9
1,074,091	+				-0.6
1,074,091	+				-0.1
1,074,092	-				+1.1
1,074,097	-				-0.3
1,074,165	-				-0.4
1,074,180	-				+0.1
1,074,190	+				-0.1
1,074,216	+				+0.8
1,074,361	-		BBR_RS14710	0.16	-0.4
1,074,405	+		BBR_RS14710	0.19	-0.5
1,074,413	-		BBR_RS14710	0.20	-0.4
1,074,413	-		BBR_RS14710	0.20	-0.0
1,074,443	+		BBR_RS14710	0.22	-0.7
1,074,451	-		BBR_RS14710	0.23	-1.0
1,074,451	-		BBR_RS14710	0.23	+1.6
1,074,451	-		BBR_RS14710	0.23	+1.5
1,074,505	-		BBR_RS14710	0.27	-0.2
1,074,512	+		BBR_RS14710	0.28	+0.1
1,074,519	-		BBR_RS14710	0.28	+0.0
1,074,521	+		BBR_RS14710	0.28	+0.4
1,074,565	-		BBR_RS14710	0.32	-0.3
1,074,567	+		BBR_RS14710	0.32	-1.6
1,074,567	+		BBR_RS14710	0.32	+0.6
1,074,575	-		BBR_RS14710	0.33	+0.4
1,074,632	+		BBR_RS14710	0.37	-0.6
1,074,632	+		BBR_RS14710	0.37	+0.6
1,074,751	+		BBR_RS14710	0.47	+0.8