Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS12590

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
581,428	+				-0.3
581,494	+				-0.4
581,494	+				-0.2
581,501	+				+0.3
581,502	-				+1.0
581,502	-				+1.4
581,509	-				-0.2
581,509	-				+0.0
581,509	-				-0.7
581,509	-				-0.5
581,509	-				-0.7
581,509	-				+0.8
581,582	-				-1.2
581,804	-		BBR_RS12590	0.33	-1.0
581,804	-		BBR_RS12590	0.33	-0.5
581,927	-		BBR_RS12590	0.47	-0.6
581,952	-		BBR_RS12590	0.50	-0.8
582,206	-		BBR_RS12590	0.79	+0.6
582,242	-		BBR_RS12590	0.83	+0.4
582,340	-				-2.6
582,350	-				+0.4
582,432	-				+0.1
582,477	-				+0.8
582,562	+		BBR_RS12595	0.14	+0.0