Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS10620

Experiment: reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	reconstituted MRS with Bioecolians-prebiotic 0.5 %w/v
101,178	+				-1.7
101,238	-				-0.0
101,245	-				-0.9
101,325	-		BBR_RS10620	0.12	-1.2
101,325	-		BBR_RS10620	0.12	-1.1
101,325	-		BBR_RS10620	0.12	-2.0
101,325	-		BBR_RS10620	0.12	-0.5
101,412	-		BBR_RS10620	0.18	-2.0
101,424	-		BBR_RS10620	0.19	-3.1
101,424	-		BBR_RS10620	0.19	-4.2
101,439	-		BBR_RS10620	0.20	-2.8
101,489	-		BBR_RS10620	0.23	-0.9
101,490	-		BBR_RS10620	0.23	-2.4
101,491	-		BBR_RS10620	0.23	-0.9
101,523	+		BBR_RS10620	0.25	+1.5
101,536	-		BBR_RS10620	0.25	-2.8
102,763	-				-0.6
102,808	-		BBR_RS10625	0.12	-2.3
102,808	-		BBR_RS10625	0.12	-1.5
102,810	-		BBR_RS10625	0.12	-2.8
102,860	-		BBR_RS10625	0.22	+0.2
103,275	-				-0.0
103,275	-				-0.9
103,275	-				-0.2
103,275	-				-0.8
103,275	-				-0.4
103,275	-				+1.3
103,275	-				-1.3
103,307	-				-1.5
103,307	-				-1.0
103,307	-				-1.1
103,312	-				-1.6
103,332	-				-0.6
103,337	-				-0.9