Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2448 and DvMF_2449 are separated by 394 nucleotides DvMF_2449 and DvMF_2450 are separated by 96 nucleotides
DvMF_2448: DvMF_2448 - CopG domain protein DNA-binding domain protein (RefSeq), at 3,083,068 to 3,083,475
_2448
DvMF_2449: DvMF_2449 - formamidopyrimidine-DNA glycosylase (RefSeq), at 3,083,870 to 3,084,880
_2449
DvMF_2450: DvMF_2450 - ComEC/Rec2-related protein (RefSeq), at 3,084,977 to 3,088,279
_2450
Position (kb)
3083
3084
3085 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3082.875 kb on + strand at 3082.971 kb on - strand at 3083.045 kb on + strand at 3083.086 kb on - strand at 3083.162 kb on + strand, within DvMF_2448 at 3083.321 kb on + strand, within DvMF_2448 at 3083.345 kb on + strand, within DvMF_2448 at 3083.350 kb on + strand, within DvMF_2448 at 3083.363 kb on - strand, within DvMF_2448 at 3083.871 kb on + strand at 3083.874 kb on - strand at 3083.895 kb on - strand at 3083.969 kb on + strand at 3083.969 kb on + strand at 3083.998 kb on + strand, within DvMF_2449 at 3084.056 kb on + strand, within DvMF_2449 at 3084.571 kb on + strand, within DvMF_2449 at 3084.770 kb on - strand, within DvMF_2449 at 3084.843 kb on + strand at 3084.954 kb on + strand at 3085.083 kb on + strand at 3085.591 kb on + strand, within DvMF_2450 at 3085.806 kb on + strand, within DvMF_2450
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 3,082,875 + -0.2 3,082,971 - -0.7 3,083,045 + -0.4 3,083,086 - +0.2 3,083,162 + DvMF_2448 0.23 -1.4 3,083,321 + DvMF_2448 0.62 -0.3 3,083,345 + DvMF_2448 0.68 -0.5 3,083,350 + DvMF_2448 0.69 -0.6 3,083,363 - DvMF_2448 0.72 -0.4 3,083,871 + -0.6 3,083,874 - -0.3 3,083,895 - -1.5 3,083,969 + +0.2 3,083,969 + -0.6 3,083,998 + DvMF_2449 0.13 -1.0 3,084,056 + DvMF_2449 0.18 -3.3 3,084,571 + DvMF_2449 0.69 -0.6 3,084,770 - DvMF_2449 0.89 -1.0 3,084,843 + -0.1 3,084,954 + -0.3 3,085,083 + -1.4 3,085,591 + DvMF_2450 0.19 -0.2 3,085,806 + DvMF_2450 0.25 -0.0
Or see this region's nucleotide sequence