Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1528 and DvMF_1529 are separated by 72 nucleotides DvMF_1529 and DvMF_1530 are separated by 371 nucleotides DvMF_1530 and DvMF_1531 are separated by 422 nucleotides DvMF_1531 and DvMF_1532 are separated by 221 nucleotides
DvMF_1528: DvMF_1528 - phospholipase D/Transphosphatidylase (RefSeq), at 1,883,223 to 1,884,692
_1528
DvMF_1529: DvMF_1529 - UspA domain protein (RefSeq), at 1,884,765 to 1,885,190
_1529
DvMF_1530: DvMF_1530 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq), at 1,885,562 to 1,888,252
_1530
DvMF_1531: DvMF_1531 - hypothetical protein (RefSeq), at 1,888,675 to 1,888,866
_1531
DvMF_1532: DvMF_1532 - carboxynorspermidine decarboxylase (RefSeq), at 1,889,088 to 1,890,305
_1532
Position (kb)
1885
1886
1887
1888
1889 Strain fitness (log2 ratio)
-1
0
1 at 1884.562 kb on - strand at 1884.634 kb on - strand at 1884.719 kb on - strand at 1884.918 kb on - strand, within DvMF_1529 at 1884.951 kb on - strand, within DvMF_1529 at 1885.028 kb on - strand, within DvMF_1529 at 1885.209 kb on - strand at 1885.211 kb on - strand at 1885.335 kb on + strand at 1885.901 kb on + strand, within DvMF_1530 at 1886.160 kb on + strand, within DvMF_1530 at 1886.192 kb on - strand, within DvMF_1530 at 1886.419 kb on - strand, within DvMF_1530 at 1886.444 kb on - strand, within DvMF_1530 at 1886.701 kb on + strand, within DvMF_1530 at 1886.869 kb on + strand, within DvMF_1530 at 1887.022 kb on + strand, within DvMF_1530 at 1887.065 kb on - strand, within DvMF_1530 at 1887.743 kb on + strand, within DvMF_1530 at 1887.953 kb on + strand, within DvMF_1530 at 1888.073 kb on - strand at 1888.332 kb on - strand at 1888.446 kb on - strand at 1888.478 kb on + strand at 1888.500 kb on - strand at 1888.500 kb on - strand at 1888.638 kb on - strand at 1888.680 kb on - strand at 1888.754 kb on - strand, within DvMF_1531 at 1889.009 kb on + strand at 1889.041 kb on - strand at 1889.079 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 1,884,562 - -1.1 1,884,634 - -1.3 1,884,719 - -1.4 1,884,918 - DvMF_1529 0.36 -0.1 1,884,951 - DvMF_1529 0.44 -1.2 1,885,028 - DvMF_1529 0.62 -0.4 1,885,209 - -0.3 1,885,211 - +0.1 1,885,335 + -0.6 1,885,901 + DvMF_1530 0.13 -0.6 1,886,160 + DvMF_1530 0.22 -0.9 1,886,192 - DvMF_1530 0.23 -0.1 1,886,419 - DvMF_1530 0.32 -0.5 1,886,444 - DvMF_1530 0.33 -0.6 1,886,701 + DvMF_1530 0.42 -1.2 1,886,869 + DvMF_1530 0.49 +0.1 1,887,022 + DvMF_1530 0.54 -1.2 1,887,065 - DvMF_1530 0.56 -0.7 1,887,743 + DvMF_1530 0.81 -0.7 1,887,953 + DvMF_1530 0.89 -1.7 1,888,073 - -0.9 1,888,332 - -0.9 1,888,446 - -0.5 1,888,478 + -0.7 1,888,500 - -0.1 1,888,500 - -0.4 1,888,638 - -0.8 1,888,680 - -0.6 1,888,754 - DvMF_1531 0.41 -0.6 1,889,009 + +0.4 1,889,041 - +0.0 1,889,079 - +0.0
Or see this region's nucleotide sequence