Experiment: Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1842 and DVU1843 are separated by 45 nucleotides DVU1843 and DVU1844 overlap by 17 nucleotides DVU1844 and DVU1845 overlap by 4 nucleotides DVU1845 and pgsA are separated by 29 nucleotides pgsA and DVU1847 are separated by 118 nucleotides
DVU1842: DVU1842 - lipoprotein, putative (TIGR), at 1,912,544 to 1,913,500
DVU1842
DVU1843: DVU1843 - hypothetical protein (TIGR), at 1,913,546 to 1,914,499
DVU1843
DVU1844: DVU1844 - septum formation initiator family protein (TIGR), at 1,914,483 to 1,914,812
DVU1844
DVU1845: DVU1845 - hypothetical protein (TIGR), at 1,914,809 to 1,915,081
DVU1845
DVU1846: pgsA - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (TIGR), at 1,915,111 to 1,915,668
pgsA
DVU1847: DVU1847 - conserved hypothetical protein (TIGR), at 1,915,787 to 1,916,680
DVU1847
Position (kb)
1914
1915 Strain fitness (log2 ratio)
-1
0
1
2 at 1913.542 kb on + strand at 1913.738 kb on + strand, within DVU1843 at 1913.783 kb on - strand, within DVU1843 at 1913.823 kb on + strand, within DVU1843 at 1913.837 kb on - strand, within DVU1843 at 1914.110 kb on - strand, within DVU1843 at 1914.202 kb on + strand, within DVU1843 at 1914.270 kb on + strand, within DVU1843 at 1914.535 kb on + strand, within DVU1844 at 1915.108 kb on + strand at 1915.720 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract remove 1,913,542 + -0.6 1,913,738 + DVU1843 0.20 -0.6 1,913,783 - DVU1843 0.25 +0.2 1,913,823 + DVU1843 0.29 +0.3 1,913,837 - DVU1843 0.31 -0.7 1,914,110 - DVU1843 0.59 +0.3 1,914,202 + DVU1843 0.69 +1.9 1,914,270 + DVU1843 0.76 -0.9 1,914,535 + DVU1844 0.16 +0.6 1,915,108 + +0.3 1,915,720 - -0.2
Or see this region's nucleotide sequence