Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05600 and H281DRAFT_05601 are separated by 216 nucleotides H281DRAFT_05601 and H281DRAFT_05602 are separated by 116 nucleotides
H281DRAFT_05600: H281DRAFT_05600 - cell division checkpoint GTPase YihA, at 19,161 to 19,814
_05600
H281DRAFT_05601: H281DRAFT_05601 - hypothetical protein, at 20,031 to 20,684
_05601
H281DRAFT_05602: H281DRAFT_05602 - cytochrome c biogenesis protein, at 20,801 to 22,999
_05602
Position (kb)
20
21 Strain fitness (log2 ratio)
-2
-1
0
1 at 19.882 kb on - strand at 19.897 kb on - strand at 19.897 kb on - strand at 19.902 kb on - strand at 19.906 kb on + strand at 19.906 kb on + strand at 19.906 kb on + strand at 19.907 kb on - strand at 19.907 kb on - strand at 19.907 kb on - strand at 19.907 kb on - strand at 19.984 kb on + strand at 19.984 kb on + strand at 19.984 kb on + strand at 20.069 kb on - strand at 20.069 kb on - strand at 20.069 kb on - strand at 20.239 kb on - strand, within H281DRAFT_05601 at 20.319 kb on - strand, within H281DRAFT_05601 at 20.365 kb on - strand, within H281DRAFT_05601 at 20.548 kb on - strand, within H281DRAFT_05601 at 20.665 kb on - strand at 20.682 kb on + strand at 20.682 kb on + strand at 20.682 kb on + strand at 20.683 kb on - strand at 20.796 kb on + strand at 20.796 kb on + strand at 20.868 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 19,882 - -0.2 19,897 - -0.8 19,897 - -0.1 19,902 - +1.2 19,906 + -0.5 19,906 + -0.0 19,906 + +0.1 19,907 - +0.5 19,907 - +0.7 19,907 - +0.7 19,907 - +0.8 19,984 + +0.3 19,984 + -0.1 19,984 + -0.2 20,069 - -2.2 20,069 - +0.0 20,069 - -0.6 20,239 - H281DRAFT_05601 0.32 +0.3 20,319 - H281DRAFT_05601 0.44 -1.4 20,365 - H281DRAFT_05601 0.51 -1.7 20,548 - H281DRAFT_05601 0.79 -1.3 20,665 - -0.8 20,682 + +0.4 20,682 + +0.1 20,682 + +0.1 20,683 - -0.5 20,796 + -1.6 20,796 + +0.2 20,868 + -0.8
Or see this region's nucleotide sequence