Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05490 and H281DRAFT_05491 are separated by 247 nucleotides H281DRAFT_05491 and H281DRAFT_05492 are separated by 20 nucleotides
H281DRAFT_05490: H281DRAFT_05490 - Outer membrane protein (porin), at 68,494 to 69,606
_05490
H281DRAFT_05491: H281DRAFT_05491 - Acyl-CoA reductase, at 69,854 to 71,299
_05491
H281DRAFT_05492: H281DRAFT_05492 - putative spermidine/putrescine transport system ATP-binding protein, at 71,320 to 72,438
_05492
Position (kb) 69
70
71
72 Strain fitness (log2 ratio) -1
0
1 at 68.858 kb on + strand at 68.858 kb on + strand, within H281DRAFT_05490 at 68.927 kb on + strand, within H281DRAFT_05490 at 69.081 kb on - strand, within H281DRAFT_05490 at 69.150 kb on + strand, within H281DRAFT_05490 at 69.151 kb on - strand, within H281DRAFT_05490 at 69.151 kb on - strand, within H281DRAFT_05490 at 69.154 kb on - strand, within H281DRAFT_05490 at 69.173 kb on + strand, within H281DRAFT_05490 at 69.252 kb on - strand, within H281DRAFT_05490 at 69.279 kb on - strand, within H281DRAFT_05490 at 69.441 kb on - strand, within H281DRAFT_05490 at 69.621 kb on + strand at 69.668 kb on + strand at 69.821 kb on - strand at 69.846 kb on + strand at 69.918 kb on + strand at 70.407 kb on + strand, within H281DRAFT_05491 at 70.408 kb on - strand, within H281DRAFT_05491 at 70.498 kb on - strand, within H281DRAFT_05491 at 70.884 kb on + strand, within H281DRAFT_05491 at 70.885 kb on - strand, within H281DRAFT_05491 at 70.888 kb on - strand, within H281DRAFT_05491 at 70.984 kb on + strand, within H281DRAFT_05491 at 71.155 kb on - strand at 71.277 kb on + strand at 71.277 kb on + strand at 71.278 kb on - strand at 71.304 kb on + strand at 71.306 kb on + strand at 71.325 kb on + strand at 71.325 kb on + strand at 71.426 kb on + strand at 71.502 kb on - strand, within H281DRAFT_05492 at 71.706 kb on + strand, within H281DRAFT_05492 at 71.762 kb on + strand, within H281DRAFT_05492 at 71.861 kb on + strand, within H281DRAFT_05492 at 71.861 kb on + strand, within H281DRAFT_05492 at 71.861 kb on + strand, within H281DRAFT_05492 at 71.861 kb on + strand, within H281DRAFT_05492 at 71.862 kb on - strand, within H281DRAFT_05492 at 71.862 kb on - strand, within H281DRAFT_05492 at 71.862 kb on - strand, within H281DRAFT_05492 at 71.862 kb on - strand, within H281DRAFT_05492 at 71.890 kb on + strand, within H281DRAFT_05492 at 71.890 kb on + strand, within H281DRAFT_05492 at 71.907 kb on - strand, within H281DRAFT_05492 at 72.113 kb on - strand, within H281DRAFT_05492 at 72.159 kb on + strand, within H281DRAFT_05492 at 72.159 kb on + strand, within H281DRAFT_05492 at 72.159 kb on + strand, within H281DRAFT_05492 at 72.160 kb on - strand, within H281DRAFT_05492 at 72.160 kb on - strand, within H281DRAFT_05492 at 72.160 kb on - strand, within H281DRAFT_05492 at 72.160 kb on - strand, within H281DRAFT_05492 at 72.160 kb on - strand, within H281DRAFT_05492 at 72.177 kb on - strand, within H281DRAFT_05492 at 72.207 kb on + strand, within H281DRAFT_05492
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 68,858 + +0.6 68,858 + H281DRAFT_05490 0.33 +0.4 68,927 + H281DRAFT_05490 0.39 +0.3 69,081 - H281DRAFT_05490 0.53 -0.2 69,150 + H281DRAFT_05490 0.59 -0.1 69,151 - H281DRAFT_05490 0.59 +0.4 69,151 - H281DRAFT_05490 0.59 +0.1 69,154 - H281DRAFT_05490 0.59 +0.3 69,173 + H281DRAFT_05490 0.61 +0.5 69,252 - H281DRAFT_05490 0.68 +1.0 69,279 - H281DRAFT_05490 0.71 -0.9 69,441 - H281DRAFT_05490 0.85 +0.2 69,621 + +0.4 69,668 + -0.2 69,821 - -0.0 69,846 + -0.4 69,918 + +0.5 70,407 + H281DRAFT_05491 0.38 +1.0 70,408 - H281DRAFT_05491 0.38 -0.1 70,498 - H281DRAFT_05491 0.45 -0.4 70,884 + H281DRAFT_05491 0.71 +1.2 70,885 - H281DRAFT_05491 0.71 +0.4 70,888 - H281DRAFT_05491 0.72 +0.2 70,984 + H281DRAFT_05491 0.78 -0.2 71,155 - +0.6 71,277 + -0.3 71,277 + +0.6 71,278 - +0.8 71,304 + +0.5 71,306 + +0.7 71,325 + -0.0 71,325 + -0.6 71,426 + +0.5 71,502 - H281DRAFT_05492 0.16 +0.3 71,706 + H281DRAFT_05492 0.34 +0.3 71,762 + H281DRAFT_05492 0.39 +0.2 71,861 + H281DRAFT_05492 0.48 +1.0 71,861 + H281DRAFT_05492 0.48 +0.5 71,861 + H281DRAFT_05492 0.48 -0.1 71,861 + H281DRAFT_05492 0.48 -0.8 71,862 - H281DRAFT_05492 0.48 -0.6 71,862 - H281DRAFT_05492 0.48 +0.8 71,862 - H281DRAFT_05492 0.48 +0.5 71,862 - H281DRAFT_05492 0.48 -0.0 71,890 + H281DRAFT_05492 0.51 +0.3 71,890 + H281DRAFT_05492 0.51 +0.2 71,907 - H281DRAFT_05492 0.52 -0.6 72,113 - H281DRAFT_05492 0.71 -0.9 72,159 + H281DRAFT_05492 0.75 -0.2 72,159 + H281DRAFT_05492 0.75 -0.6 72,159 + H281DRAFT_05492 0.75 -0.6 72,160 - H281DRAFT_05492 0.75 -0.3 72,160 - H281DRAFT_05492 0.75 +0.1 72,160 - H281DRAFT_05492 0.75 +0.4 72,160 - H281DRAFT_05492 0.75 -1.1 72,160 - H281DRAFT_05492 0.75 +0.4 72,177 - H281DRAFT_05492 0.77 -1.6 72,207 + H281DRAFT_05492 0.79 +1.2
Or see this region's nucleotide sequence