Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04208 and H281DRAFT_04209 are separated by 185 nucleotides H281DRAFT_04209 and H281DRAFT_04210 are separated by 9 nucleotides
H281DRAFT_04208: H281DRAFT_04208 - RecA protein, at 327,564 to 328,640
_04208
H281DRAFT_04209: H281DRAFT_04209 - two component transcriptional regulator, winged helix family, at 328,826 to 329,665
_04209
H281DRAFT_04210: H281DRAFT_04210 - two-component system, OmpR family, sensor histidine kinase TctE, at 329,675 to 331,222
_04210
Position (kb) 328
329
330 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 327.959 kb on - strand, within H281DRAFT_04208 at 328.373 kb on + strand, within H281DRAFT_04208 at 328.374 kb on - strand, within H281DRAFT_04208 at 328.655 kb on + strand at 328.655 kb on + strand at 328.655 kb on + strand at 328.656 kb on - strand at 328.656 kb on - strand at 328.813 kb on + strand at 328.908 kb on + strand at 328.908 kb on + strand at 328.908 kb on + strand at 328.909 kb on - strand at 328.949 kb on + strand, within H281DRAFT_04209 at 328.949 kb on + strand, within H281DRAFT_04209 at 328.949 kb on + strand, within H281DRAFT_04209 at 328.950 kb on - strand, within H281DRAFT_04209 at 329.065 kb on - strand, within H281DRAFT_04209 at 329.065 kb on - strand, within H281DRAFT_04209 at 329.065 kb on - strand, within H281DRAFT_04209 at 329.168 kb on + strand, within H281DRAFT_04209 at 329.168 kb on + strand, within H281DRAFT_04209 at 329.168 kb on + strand, within H281DRAFT_04209 at 329.168 kb on + strand, within H281DRAFT_04209 at 329.169 kb on - strand, within H281DRAFT_04209 at 329.169 kb on - strand, within H281DRAFT_04209 at 329.300 kb on + strand, within H281DRAFT_04209 at 329.300 kb on + strand, within H281DRAFT_04209 at 329.300 kb on + strand, within H281DRAFT_04209 at 329.301 kb on - strand at 329.302 kb on + strand, within H281DRAFT_04209 at 329.302 kb on + strand, within H281DRAFT_04209 at 329.303 kb on - strand, within H281DRAFT_04209 at 329.355 kb on + strand, within H281DRAFT_04209 at 329.453 kb on + strand, within H281DRAFT_04209 at 329.453 kb on + strand, within H281DRAFT_04209 at 329.453 kb on + strand, within H281DRAFT_04209 at 329.454 kb on - strand, within H281DRAFT_04209 at 329.454 kb on - strand, within H281DRAFT_04209 at 329.454 kb on - strand, within H281DRAFT_04209 at 329.494 kb on - strand, within H281DRAFT_04209 at 329.504 kb on - strand, within H281DRAFT_04209 at 329.523 kb on - strand, within H281DRAFT_04209 at 329.560 kb on + strand, within H281DRAFT_04209 at 329.560 kb on + strand, within H281DRAFT_04209 at 329.561 kb on - strand, within H281DRAFT_04209 at 329.561 kb on - strand, within H281DRAFT_04209 at 329.657 kb on + strand at 329.663 kb on + strand at 329.663 kb on + strand at 329.663 kb on + strand at 329.663 kb on + strand at 329.664 kb on - strand at 329.664 kb on - strand at 329.805 kb on + strand at 329.876 kb on + strand, within H281DRAFT_04210 at 329.876 kb on + strand, within H281DRAFT_04210 at 329.877 kb on - strand, within H281DRAFT_04210 at 329.877 kb on - strand, within H281DRAFT_04210 at 329.877 kb on - strand, within H281DRAFT_04210 at 329.877 kb on - strand, within H281DRAFT_04210 at 329.877 kb on - strand, within H281DRAFT_04210 at 329.877 kb on - strand, within H281DRAFT_04210 at 329.936 kb on + strand, within H281DRAFT_04210 at 329.937 kb on - strand, within H281DRAFT_04210 at 329.937 kb on - strand, within H281DRAFT_04210 at 329.937 kb on - strand, within H281DRAFT_04210 at 329.937 kb on - strand, within H281DRAFT_04210 at 329.937 kb on - strand, within H281DRAFT_04210 at 329.937 kb on - strand, within H281DRAFT_04210 at 329.937 kb on - strand, within H281DRAFT_04210 at 330.179 kb on + strand, within H281DRAFT_04210 at 330.179 kb on + strand, within H281DRAFT_04210 at 330.180 kb on - strand, within H281DRAFT_04210 at 330.180 kb on - strand, within H281DRAFT_04210 at 330.181 kb on + strand, within H281DRAFT_04210 at 330.181 kb on + strand, within H281DRAFT_04210 at 330.181 kb on + strand, within H281DRAFT_04210 at 330.182 kb on - strand, within H281DRAFT_04210 at 330.386 kb on - strand, within H281DRAFT_04210
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 327,959 - H281DRAFT_04208 0.37 +0.3 328,373 + H281DRAFT_04208 0.75 -0.7 328,374 - H281DRAFT_04208 0.75 -0.0 328,655 + +0.4 328,655 + -1.9 328,655 + +0.2 328,656 - -0.9 328,656 - +1.0 328,813 + -0.8 328,908 + -1.3 328,908 + +0.1 328,908 + -0.6 328,909 - -1.4 328,949 + H281DRAFT_04209 0.15 -1.3 328,949 + H281DRAFT_04209 0.15 -1.5 328,949 + H281DRAFT_04209 0.15 -1.7 328,950 - H281DRAFT_04209 0.15 -0.9 329,065 - H281DRAFT_04209 0.28 -1.2 329,065 - H281DRAFT_04209 0.28 -1.0 329,065 - H281DRAFT_04209 0.28 -1.3 329,168 + H281DRAFT_04209 0.41 -1.1 329,168 + H281DRAFT_04209 0.41 -1.6 329,168 + H281DRAFT_04209 0.41 +0.1 329,168 + H281DRAFT_04209 0.41 -1.1 329,169 - H281DRAFT_04209 0.41 -2.1 329,169 - H281DRAFT_04209 0.41 -2.0 329,300 + H281DRAFT_04209 0.56 -1.4 329,300 + H281DRAFT_04209 0.56 -2.5 329,300 + H281DRAFT_04209 0.56 -3.9 329,301 - +0.7 329,302 + H281DRAFT_04209 0.57 -2.5 329,302 + H281DRAFT_04209 0.57 -3.0 329,303 - H281DRAFT_04209 0.57 -2.1 329,355 + H281DRAFT_04209 0.63 -2.4 329,453 + H281DRAFT_04209 0.75 -1.2 329,453 + H281DRAFT_04209 0.75 +0.6 329,453 + H281DRAFT_04209 0.75 -1.3 329,454 - H281DRAFT_04209 0.75 -0.9 329,454 - H281DRAFT_04209 0.75 -0.4 329,454 - H281DRAFT_04209 0.75 -2.1 329,494 - H281DRAFT_04209 0.80 -1.7 329,504 - H281DRAFT_04209 0.81 -0.8 329,523 - H281DRAFT_04209 0.83 -1.6 329,560 + H281DRAFT_04209 0.87 -0.4 329,560 + H281DRAFT_04209 0.87 -0.7 329,561 - H281DRAFT_04209 0.88 -2.6 329,561 - H281DRAFT_04209 0.88 -1.1 329,657 + -1.3 329,663 + -0.1 329,663 + +0.5 329,663 + -0.3 329,663 + +0.1 329,664 - -1.1 329,664 - -2.7 329,805 + -1.8 329,876 + H281DRAFT_04210 0.13 -0.9 329,876 + H281DRAFT_04210 0.13 -1.8 329,877 - H281DRAFT_04210 0.13 -1.7 329,877 - H281DRAFT_04210 0.13 -2.0 329,877 - H281DRAFT_04210 0.13 -2.3 329,877 - H281DRAFT_04210 0.13 -1.6 329,877 - H281DRAFT_04210 0.13 -1.7 329,877 - H281DRAFT_04210 0.13 -2.2 329,936 + H281DRAFT_04210 0.17 -1.4 329,937 - H281DRAFT_04210 0.17 -1.2 329,937 - H281DRAFT_04210 0.17 -1.5 329,937 - H281DRAFT_04210 0.17 -1.8 329,937 - H281DRAFT_04210 0.17 -1.1 329,937 - H281DRAFT_04210 0.17 -1.8 329,937 - H281DRAFT_04210 0.17 -1.6 329,937 - H281DRAFT_04210 0.17 -1.9 330,179 + H281DRAFT_04210 0.33 -1.2 330,179 + H281DRAFT_04210 0.33 -2.2 330,180 - H281DRAFT_04210 0.33 -0.1 330,180 - H281DRAFT_04210 0.33 -0.8 330,181 + H281DRAFT_04210 0.33 -2.4 330,181 + H281DRAFT_04210 0.33 -1.6 330,181 + H281DRAFT_04210 0.33 -0.3 330,182 - H281DRAFT_04210 0.33 -2.3 330,386 - H281DRAFT_04210 0.46 -0.1
Or see this region's nucleotide sequence