Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00314 and H281DRAFT_00315 are separated by 100 nucleotides H281DRAFT_00315 and H281DRAFT_00316 are separated by 170 nucleotides
H281DRAFT_00314: H281DRAFT_00314 - ATP-binding cassette, subfamily B, MsbA, at 340,812 to 342,605
_00314
H281DRAFT_00315: H281DRAFT_00315 - Glycosyltransferase involved in cell wall bisynthesis, at 342,706 to 343,785
_00315
H281DRAFT_00316: H281DRAFT_00316 - ADP-heptose:LPS heptosyltransferase, at 343,956 to 345,275
_00316
Position (kb) 342
343
344 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 343.159 kb on + strand, within H281DRAFT_00315 at 343.160 kb on - strand, within H281DRAFT_00315 at 343.160 kb on - strand, within H281DRAFT_00315 at 343.354 kb on - strand, within H281DRAFT_00315 at 343.354 kb on - strand, within H281DRAFT_00315 at 343.430 kb on - strand, within H281DRAFT_00315 at 343.474 kb on - strand, within H281DRAFT_00315 at 343.784 kb on - strand at 343.784 kb on - strand at 343.940 kb on - strand at 344.057 kb on + strand at 344.108 kb on - strand, within H281DRAFT_00316 at 344.147 kb on + strand, within H281DRAFT_00316 at 344.148 kb on - strand, within H281DRAFT_00316 at 344.368 kb on + strand, within H281DRAFT_00316 at 344.368 kb on + strand, within H281DRAFT_00316 at 344.369 kb on - strand, within H281DRAFT_00316 at 344.371 kb on - strand, within H281DRAFT_00316 at 344.458 kb on - strand, within H281DRAFT_00316 at 344.493 kb on - strand, within H281DRAFT_00316 at 344.589 kb on + strand, within H281DRAFT_00316 at 344.590 kb on - strand, within H281DRAFT_00316 at 344.635 kb on + strand, within H281DRAFT_00316 at 344.635 kb on + strand at 344.636 kb on - strand, within H281DRAFT_00316 at 344.727 kb on + strand, within H281DRAFT_00316 at 344.727 kb on + strand, within H281DRAFT_00316 at 344.727 kb on + strand at 344.727 kb on + strand, within H281DRAFT_00316 at 344.728 kb on - strand, within H281DRAFT_00316
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 343,159 + H281DRAFT_00315 0.42 -2.7 343,160 - H281DRAFT_00315 0.42 -1.6 343,160 - H281DRAFT_00315 0.42 -2.9 343,354 - H281DRAFT_00315 0.60 -1.2 343,354 - H281DRAFT_00315 0.60 -1.4 343,430 - H281DRAFT_00315 0.67 -1.4 343,474 - H281DRAFT_00315 0.71 -0.8 343,784 - +0.2 343,784 - +0.3 343,940 - +1.0 344,057 + +0.0 344,108 - H281DRAFT_00316 0.12 +0.1 344,147 + H281DRAFT_00316 0.14 +0.1 344,148 - H281DRAFT_00316 0.15 -0.4 344,368 + H281DRAFT_00316 0.31 -1.3 344,368 + H281DRAFT_00316 0.31 -1.8 344,369 - H281DRAFT_00316 0.31 -1.7 344,371 - H281DRAFT_00316 0.31 -1.5 344,458 - H281DRAFT_00316 0.38 -0.1 344,493 - H281DRAFT_00316 0.41 -0.6 344,589 + H281DRAFT_00316 0.48 -3.0 344,590 - H281DRAFT_00316 0.48 -0.5 344,635 + H281DRAFT_00316 0.51 -1.5 344,635 + +2.1 344,636 - H281DRAFT_00316 0.52 -1.7 344,727 + H281DRAFT_00316 0.58 -0.3 344,727 + H281DRAFT_00316 0.58 -0.8 344,727 + -0.8 344,727 + H281DRAFT_00316 0.58 -0.8 344,728 - H281DRAFT_00316 0.58 -2.8
Or see this region's nucleotide sequence