Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00045 and H281DRAFT_00046 are separated by 178 nucleotides H281DRAFT_00046 and H281DRAFT_00047 are separated by 203 nucleotides
H281DRAFT_00045: H281DRAFT_00045 - hypothetical protein, at 48,285 to 48,983
_00045
H281DRAFT_00046: H281DRAFT_00046 - Predicted periplasmic or secreted lipoprotein, at 49,162 to 49,542
_00046
H281DRAFT_00047: H281DRAFT_00047 - protease I, at 49,746 to 50,327
_00047
Position (kb) 49
50 Strain fitness (log2 ratio) -1
0
1 at 48.302 kb on - strand at 48.307 kb on + strand at 48.308 kb on - strand at 48.308 kb on - strand at 48.357 kb on - strand, within H281DRAFT_00045 at 48.481 kb on - strand, within H281DRAFT_00045 at 48.687 kb on - strand, within H281DRAFT_00045 at 48.764 kb on - strand, within H281DRAFT_00045 at 48.796 kb on + strand, within H281DRAFT_00045 at 48.796 kb on + strand, within H281DRAFT_00045 at 48.797 kb on - strand, within H281DRAFT_00045 at 48.838 kb on + strand, within H281DRAFT_00045 at 48.838 kb on + strand, within H281DRAFT_00045 at 48.839 kb on - strand, within H281DRAFT_00045 at 48.917 kb on - strand at 49.020 kb on - strand at 49.043 kb on + strand at 49.044 kb on - strand at 49.144 kb on + strand at 49.161 kb on - strand at 49.356 kb on + strand, within H281DRAFT_00046 at 49.541 kb on - strand at 49.739 kb on + strand at 49.739 kb on + strand at 49.745 kb on + strand at 49.746 kb on - strand at 49.848 kb on - strand, within H281DRAFT_00047 at 49.883 kb on - strand, within H281DRAFT_00047 at 49.920 kb on + strand, within H281DRAFT_00047 at 49.920 kb on + strand, within H281DRAFT_00047 at 49.921 kb on - strand, within H281DRAFT_00047 at 50.026 kb on - strand, within H281DRAFT_00047 at 50.116 kb on + strand, within H281DRAFT_00047 at 50.326 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 48,302 - -0.8 48,307 + -0.1 48,308 - +0.2 48,308 - +0.9 48,357 - H281DRAFT_00045 0.10 +0.3 48,481 - H281DRAFT_00045 0.28 +0.3 48,687 - H281DRAFT_00045 0.58 -0.6 48,764 - H281DRAFT_00045 0.69 -0.1 48,796 + H281DRAFT_00045 0.73 +0.1 48,796 + H281DRAFT_00045 0.73 -0.4 48,797 - H281DRAFT_00045 0.73 +0.1 48,838 + H281DRAFT_00045 0.79 +1.2 48,838 + H281DRAFT_00045 0.79 +0.2 48,839 - H281DRAFT_00045 0.79 +0.1 48,917 - -0.2 49,020 - -0.5 49,043 + -0.3 49,044 - -0.2 49,144 + +1.3 49,161 - +0.1 49,356 + H281DRAFT_00046 0.51 -0.8 49,541 - +0.3 49,739 + +0.1 49,739 + +0.1 49,745 + -0.0 49,746 - -0.5 49,848 - H281DRAFT_00047 0.18 +0.6 49,883 - H281DRAFT_00047 0.24 +0.3 49,920 + H281DRAFT_00047 0.30 -0.4 49,920 + H281DRAFT_00047 0.30 -0.7 49,921 - H281DRAFT_00047 0.30 -0.1 50,026 - H281DRAFT_00047 0.48 -0.6 50,116 + H281DRAFT_00047 0.64 +0.5 50,326 - +1.5
Or see this region's nucleotide sequence