Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09505 and BWI76_RS09510 overlap by 1 nucleotides BWI76_RS09510 and BWI76_RS09515 are separated by 6 nucleotides BWI76_RS09515 and BWI76_RS09520 are separated by 19 nucleotides BWI76_RS09520 and BWI76_RS09525 are separated by 227 nucleotides
BWI76_RS09505: BWI76_RS09505 - arginine transporter permease subunit ArtM, at 1,989,836 to 1,990,504
_RS09505
BWI76_RS09510: BWI76_RS09510 - arginine transporter permease subunit ArtQ, at 1,990,504 to 1,991,220
_RS09510
BWI76_RS09515: BWI76_RS09515 - arginine ABC transporter substrate-binding protein, at 1,991,227 to 1,991,958
_RS09515
BWI76_RS09520: BWI76_RS09520 - arginine ABC transporter ATP-binding protein ArtP, at 1,991,978 to 1,992,706
_RS09520
BWI76_RS09525: BWI76_RS09525 - lipoprotein, at 1,992,934 to 1,993,449
_RS09525
Position (kb) 1991
1992 Strain fitness (log2 ratio) -1
0
1
2 at 1990.229 kb on + strand, within BWI76_RS09505 at 1990.365 kb on + strand, within BWI76_RS09505 at 1990.365 kb on + strand, within BWI76_RS09505 at 1991.614 kb on - strand, within BWI76_RS09515 at 1991.655 kb on - strand, within BWI76_RS09515 at 1991.797 kb on - strand, within BWI76_RS09515 at 1992.117 kb on + strand, within BWI76_RS09520 at 1992.383 kb on + strand, within BWI76_RS09520 at 1992.421 kb on - strand, within BWI76_RS09520 at 1992.655 kb on - strand at 1992.704 kb on + strand at 1992.704 kb on + strand at 1992.712 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 1,990,229 + BWI76_RS09505 0.59 +0.4 1,990,365 + BWI76_RS09505 0.79 +0.5 1,990,365 + BWI76_RS09505 0.79 +0.9 1,991,614 - BWI76_RS09515 0.53 +0.7 1,991,655 - BWI76_RS09515 0.58 +2.2 1,991,797 - BWI76_RS09515 0.78 +0.9 1,992,117 + BWI76_RS09520 0.19 +0.6 1,992,383 + BWI76_RS09520 0.56 +0.8 1,992,421 - BWI76_RS09520 0.61 +0.3 1,992,655 - +0.1 1,992,704 + +2.0 1,992,704 + +0.4 1,992,712 - +0.8
Or see this region's nucleotide sequence