Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3922 and Dshi_3923 are separated by 60 nucleotides Dshi_3923 and Dshi_3924 are separated by 25 nucleotides Dshi_3924 and Dshi_3925 are separated by 65 nucleotides Dshi_3925 and Dshi_3926 are separated by 1 nucleotides
Dshi_3922: Dshi_3922 - transport protein, putative (RefSeq), at 147,270 to 148,109
_3922
Dshi_3923: Dshi_3923 - hypothetical protein (RefSeq), at 148,170 to 148,334
_3923
Dshi_3924: Dshi_3924 - hypothetical protein (RefSeq), at 148,360 to 148,554
_3924
Dshi_3925: Dshi_3925 - peptidase C26 (RefSeq), at 148,620 to 149,342
_3925
Dshi_3926: Dshi_3926 - hypothetical protein (RefSeq), at 149,344 to 150,306
_3926
Position (kb) 148
149 Strain fitness (log2 ratio) -1
0
1 at 147.541 kb on - strand, within Dshi_3922 at 147.675 kb on + strand, within Dshi_3922 at 147.747 kb on - strand, within Dshi_3922 at 147.749 kb on + strand, within Dshi_3922 at 147.765 kb on + strand, within Dshi_3922 at 147.798 kb on + strand, within Dshi_3922 at 147.806 kb on - strand, within Dshi_3922 at 147.815 kb on + strand, within Dshi_3922 at 147.928 kb on - strand, within Dshi_3922 at 147.972 kb on - strand, within Dshi_3922 at 147.979 kb on - strand, within Dshi_3922 at 148.030 kb on - strand at 148.073 kb on - strand at 148.073 kb on - strand at 148.085 kb on - strand at 148.128 kb on - strand at 148.133 kb on + strand at 148.273 kb on - strand, within Dshi_3923 at 148.402 kb on - strand, within Dshi_3924 at 148.402 kb on - strand, within Dshi_3924 at 148.445 kb on - strand, within Dshi_3924 at 148.513 kb on - strand, within Dshi_3924 at 148.601 kb on - strand at 148.601 kb on - strand at 148.637 kb on + strand at 148.803 kb on - strand, within Dshi_3925 at 148.803 kb on - strand, within Dshi_3925 at 148.807 kb on - strand, within Dshi_3925 at 148.873 kb on + strand, within Dshi_3925 at 148.923 kb on + strand, within Dshi_3925 at 149.119 kb on + strand, within Dshi_3925 at 149.246 kb on - strand, within Dshi_3925 at 149.246 kb on - strand, within Dshi_3925 at 149.261 kb on + strand, within Dshi_3925 at 149.307 kb on + strand at 149.337 kb on + strand at 149.337 kb on + strand at 149.382 kb on - strand at 149.461 kb on + strand, within Dshi_3926 at 149.510 kb on + strand, within Dshi_3926
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 147,541 - Dshi_3922 0.32 -0.7 147,675 + Dshi_3922 0.48 -0.0 147,747 - Dshi_3922 0.57 +1.0 147,749 + Dshi_3922 0.57 +0.1 147,765 + Dshi_3922 0.59 -0.8 147,798 + Dshi_3922 0.63 +0.0 147,806 - Dshi_3922 0.64 +0.5 147,815 + Dshi_3922 0.65 -0.5 147,928 - Dshi_3922 0.78 +0.2 147,972 - Dshi_3922 0.84 +0.7 147,979 - Dshi_3922 0.84 +0.4 148,030 - +0.2 148,073 - +0.8 148,073 - -1.1 148,085 - +0.4 148,128 - +1.0 148,133 + -0.9 148,273 - Dshi_3923 0.62 -0.6 148,402 - Dshi_3924 0.22 +1.1 148,402 - Dshi_3924 0.22 +0.1 148,445 - Dshi_3924 0.44 -0.5 148,513 - Dshi_3924 0.78 -0.2 148,601 - -0.8 148,601 - -0.2 148,637 + +0.6 148,803 - Dshi_3925 0.25 -0.5 148,803 - Dshi_3925 0.25 -0.1 148,807 - Dshi_3925 0.26 -1.0 148,873 + Dshi_3925 0.35 +0.2 148,923 + Dshi_3925 0.42 -1.4 149,119 + Dshi_3925 0.69 -1.2 149,246 - Dshi_3925 0.87 -0.1 149,246 - Dshi_3925 0.87 +0.1 149,261 + Dshi_3925 0.89 -0.5 149,307 + -0.2 149,337 + +1.4 149,337 + -0.3 149,382 - -0.4 149,461 + Dshi_3926 0.12 +0.5 149,510 + Dshi_3926 0.17 -0.7
Or see this region's nucleotide sequence