Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3464 and Dshi_3465 are separated by 12 nucleotides Dshi_3465 and Dshi_3466 are separated by 33 nucleotides
Dshi_3464: Dshi_3464 - heat-inducible transcription repressor HrcA (RefSeq), at 3,644,431 to 3,645,495
_3464
Dshi_3465: Dshi_3465 - GrpE protein (RefSeq), at 3,645,508 to 3,646,101
_3465
Dshi_3466: Dshi_3466 - DNA mismatch repair protein MutS (RefSeq), at 3,646,135 to 3,648,768
_3466
Position (kb)
3645
3646
3647 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3644.535 kb on - strand at 3644.539 kb on + strand, within Dshi_3464 at 3644.550 kb on + strand, within Dshi_3464 at 3644.558 kb on - strand, within Dshi_3464 at 3644.583 kb on - strand, within Dshi_3464 at 3644.653 kb on - strand, within Dshi_3464 at 3644.709 kb on + strand, within Dshi_3464 at 3644.717 kb on - strand, within Dshi_3464 at 3644.720 kb on + strand, within Dshi_3464 at 3644.772 kb on + strand, within Dshi_3464 at 3644.781 kb on + strand, within Dshi_3464 at 3644.786 kb on + strand, within Dshi_3464 at 3644.791 kb on + strand, within Dshi_3464 at 3644.794 kb on - strand, within Dshi_3464 at 3644.796 kb on + strand, within Dshi_3464 at 3644.819 kb on + strand, within Dshi_3464 at 3644.819 kb on + strand, within Dshi_3464 at 3644.819 kb on + strand, within Dshi_3464 at 3644.819 kb on + strand, within Dshi_3464 at 3644.827 kb on - strand, within Dshi_3464 at 3644.838 kb on + strand, within Dshi_3464 at 3644.856 kb on - strand, within Dshi_3464 at 3644.876 kb on + strand, within Dshi_3464 at 3644.884 kb on - strand, within Dshi_3464 at 3644.884 kb on - strand, within Dshi_3464 at 3644.889 kb on - strand, within Dshi_3464 at 3644.892 kb on + strand, within Dshi_3464 at 3644.892 kb on + strand, within Dshi_3464 at 3644.892 kb on + strand, within Dshi_3464 at 3644.893 kb on + strand, within Dshi_3464 at 3644.900 kb on - strand, within Dshi_3464 at 3644.900 kb on - strand, within Dshi_3464 at 3644.900 kb on - strand, within Dshi_3464 at 3644.900 kb on - strand, within Dshi_3464 at 3644.934 kb on - strand, within Dshi_3464 at 3644.956 kb on + strand, within Dshi_3464 at 3645.002 kb on - strand, within Dshi_3464 at 3645.010 kb on - strand, within Dshi_3464 at 3645.014 kb on + strand, within Dshi_3464 at 3645.058 kb on + strand, within Dshi_3464 at 3645.064 kb on + strand, within Dshi_3464 at 3645.100 kb on + strand, within Dshi_3464 at 3645.107 kb on - strand, within Dshi_3464 at 3645.203 kb on + strand, within Dshi_3464 at 3645.204 kb on + strand, within Dshi_3464 at 3645.267 kb on - strand, within Dshi_3464 at 3645.271 kb on - strand, within Dshi_3464 at 3645.271 kb on - strand, within Dshi_3464 at 3645.273 kb on + strand, within Dshi_3464 at 3645.273 kb on + strand, within Dshi_3464 at 3645.281 kb on - strand, within Dshi_3464 at 3645.282 kb on + strand, within Dshi_3464 at 3645.292 kb on - strand, within Dshi_3464 at 3645.292 kb on - strand, within Dshi_3464 at 3645.373 kb on + strand, within Dshi_3464 at 3645.415 kb on + strand at 3645.474 kb on + strand at 3645.474 kb on + strand at 3645.474 kb on + strand at 3646.085 kb on - strand at 3646.127 kb on - strand at 3646.369 kb on + strand at 3646.415 kb on + strand, within Dshi_3466 at 3646.508 kb on + strand, within Dshi_3466 at 3646.529 kb on - strand, within Dshi_3466 at 3646.620 kb on + strand, within Dshi_3466 at 3646.672 kb on + strand, within Dshi_3466 at 3646.882 kb on + strand, within Dshi_3466 at 3646.908 kb on + strand, within Dshi_3466 at 3646.994 kb on - strand, within Dshi_3466 at 3647.056 kb on + strand, within Dshi_3466
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 3,644,535 - -0.6 3,644,539 + Dshi_3464 0.10 -0.1 3,644,550 + Dshi_3464 0.11 -0.1 3,644,558 - Dshi_3464 0.12 +1.0 3,644,583 - Dshi_3464 0.14 -0.5 3,644,653 - Dshi_3464 0.21 -0.4 3,644,709 + Dshi_3464 0.26 +1.6 3,644,717 - Dshi_3464 0.27 -1.1 3,644,720 + Dshi_3464 0.27 +0.8 3,644,772 + Dshi_3464 0.32 +0.1 3,644,781 + Dshi_3464 0.33 +0.1 3,644,786 + Dshi_3464 0.33 -0.2 3,644,791 + Dshi_3464 0.34 -0.5 3,644,794 - Dshi_3464 0.34 +0.4 3,644,796 + Dshi_3464 0.34 +0.6 3,644,819 + Dshi_3464 0.36 -0.3 3,644,819 + Dshi_3464 0.36 -0.5 3,644,819 + Dshi_3464 0.36 +0.0 3,644,819 + Dshi_3464 0.36 +0.5 3,644,827 - Dshi_3464 0.37 +1.6 3,644,838 + Dshi_3464 0.38 +0.2 3,644,856 - Dshi_3464 0.40 -0.7 3,644,876 + Dshi_3464 0.42 +0.3 3,644,884 - Dshi_3464 0.43 +0.3 3,644,884 - Dshi_3464 0.43 -0.6 3,644,889 - Dshi_3464 0.43 +0.1 3,644,892 + Dshi_3464 0.43 +0.1 3,644,892 + Dshi_3464 0.43 +0.1 3,644,892 + Dshi_3464 0.43 +0.3 3,644,893 + Dshi_3464 0.43 +1.4 3,644,900 - Dshi_3464 0.44 -0.4 3,644,900 - Dshi_3464 0.44 +0.1 3,644,900 - Dshi_3464 0.44 +0.0 3,644,900 - Dshi_3464 0.44 +0.2 3,644,934 - Dshi_3464 0.47 -0.5 3,644,956 + Dshi_3464 0.49 +1.0 3,645,002 - Dshi_3464 0.54 -0.1 3,645,010 - Dshi_3464 0.54 +0.6 3,645,014 + Dshi_3464 0.55 +0.4 3,645,058 + Dshi_3464 0.59 +0.0 3,645,064 + Dshi_3464 0.59 +0.6 3,645,100 + Dshi_3464 0.63 -0.1 3,645,107 - Dshi_3464 0.63 +0.7 3,645,203 + Dshi_3464 0.72 -0.9 3,645,204 + Dshi_3464 0.73 -2.3 3,645,267 - Dshi_3464 0.78 -0.1 3,645,271 - Dshi_3464 0.79 -0.5 3,645,271 - Dshi_3464 0.79 +1.1 3,645,273 + Dshi_3464 0.79 -0.2 3,645,273 + Dshi_3464 0.79 -0.6 3,645,281 - Dshi_3464 0.80 +0.3 3,645,282 + Dshi_3464 0.80 +0.3 3,645,292 - Dshi_3464 0.81 +1.0 3,645,292 - Dshi_3464 0.81 +0.6 3,645,373 + Dshi_3464 0.88 -1.6 3,645,415 + -1.5 3,645,474 + -1.6 3,645,474 + -3.7 3,645,474 + -0.9 3,646,085 - -0.9 3,646,127 - +1.4 3,646,369 + -0.4 3,646,415 + Dshi_3466 0.11 -1.5 3,646,508 + Dshi_3466 0.14 -0.5 3,646,529 - Dshi_3466 0.15 +0.0 3,646,620 + Dshi_3466 0.18 +0.9 3,646,672 + Dshi_3466 0.20 -0.4 3,646,882 + Dshi_3466 0.28 +0.1 3,646,908 + Dshi_3466 0.29 +0.8 3,646,994 - Dshi_3466 0.33 -0.2 3,647,056 + Dshi_3466 0.35 +0.1
Or see this region's nucleotide sequence