Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2975
Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Dimethyl Sulfoxide 7.5 vol% |
---|---|---|---|---|---|
remove | |||||
3,141,726 | - | -0.1 | |||
3,141,830 | + | Dshi_2974 | 0.18 | +1.2 | |
3,141,843 | - | Dshi_2974 | 0.19 | +0.2 | |
3,141,907 | + | Dshi_2974 | 0.25 | +0.7 | |
3,141,915 | - | Dshi_2974 | 0.26 | +0.0 | |
3,141,924 | - | Dshi_2974 | 0.27 | +0.6 | |
3,141,954 | + | Dshi_2974 | 0.30 | -0.2 | |
3,141,967 | + | Dshi_2974 | 0.31 | -0.4 | |
3,141,993 | - | Dshi_2974 | 0.33 | -0.2 | |
3,141,995 | + | Dshi_2974 | 0.34 | +0.9 | |
3,141,995 | + | Dshi_2974 | 0.34 | -0.7 | |
3,142,062 | + | Dshi_2974 | 0.40 | +0.3 | |
3,142,210 | - | Dshi_2974 | 0.54 | +0.2 | |
3,142,263 | - | Dshi_2974 | 0.59 | +0.3 | |
3,142,275 | + | Dshi_2974 | 0.61 | -0.1 | |
3,142,309 | + | Dshi_2974 | 0.64 | +0.3 | |
3,142,471 | + | Dshi_2974 | 0.79 | +0.2 | |
3,142,585 | + | -0.4 | |||
3,142,626 | - | -1.1 | |||
3,142,700 | - | +0.1 | |||
3,142,745 | - | Dshi_2975 | 0.12 | +1.6 | |
3,142,905 | + | Dshi_2975 | 0.46 | +0.9 | |
3,142,991 | - | Dshi_2975 | 0.64 | +0.2 |
Or see this region's nucleotide sequence