Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2548 and Dshi_2549 are separated by 3 nucleotides Dshi_2549 and Dshi_2550 are separated by 12 nucleotides
Dshi_2548: Dshi_2548 - hypothetical protein (RefSeq), at 2,703,739 to 2,707,950
_2548
Dshi_2549: Dshi_2549 - cell surface receptor IPT/TIG domain protein (RefSeq), at 2,707,954 to 2,709,441
_2549
Dshi_2550: Dshi_2550 - hypothetical protein (RefSeq), at 2,709,454 to 2,713,869
_2550
Position (kb)
2707
2708
2709
2710 Strain fitness (log2 ratio)
-1
0
1
2 at 2707.057 kb on - strand, within Dshi_2548 at 2707.071 kb on + strand, within Dshi_2548 at 2707.113 kb on + strand, within Dshi_2548 at 2707.217 kb on - strand, within Dshi_2548 at 2707.351 kb on + strand, within Dshi_2548 at 2707.352 kb on - strand, within Dshi_2548 at 2707.457 kb on - strand, within Dshi_2548 at 2707.462 kb on + strand, within Dshi_2548 at 2707.499 kb on - strand, within Dshi_2548 at 2707.523 kb on - strand, within Dshi_2548 at 2707.562 kb on + strand at 2707.570 kb on - strand at 2707.616 kb on + strand at 2707.616 kb on + strand at 2707.727 kb on + strand at 2707.824 kb on + strand at 2707.850 kb on + strand at 2707.857 kb on + strand at 2707.866 kb on - strand at 2707.866 kb on - strand at 2707.869 kb on + strand at 2707.885 kb on - strand at 2707.942 kb on + strand at 2708.140 kb on + strand, within Dshi_2549 at 2708.149 kb on + strand, within Dshi_2549 at 2708.150 kb on - strand, within Dshi_2549 at 2708.233 kb on + strand, within Dshi_2549 at 2708.319 kb on - strand, within Dshi_2549 at 2708.340 kb on - strand, within Dshi_2549 at 2708.516 kb on + strand, within Dshi_2549 at 2708.536 kb on + strand, within Dshi_2549 at 2708.550 kb on - strand, within Dshi_2549 at 2708.673 kb on - strand, within Dshi_2549 at 2708.712 kb on + strand, within Dshi_2549 at 2708.712 kb on + strand, within Dshi_2549 at 2708.719 kb on + strand, within Dshi_2549 at 2708.720 kb on - strand, within Dshi_2549 at 2708.768 kb on - strand, within Dshi_2549 at 2708.832 kb on + strand, within Dshi_2549 at 2708.832 kb on + strand, within Dshi_2549 at 2708.837 kb on + strand, within Dshi_2549 at 2708.868 kb on - strand, within Dshi_2549 at 2708.903 kb on + strand, within Dshi_2549 at 2708.944 kb on - strand, within Dshi_2549 at 2709.087 kb on + strand, within Dshi_2549 at 2709.172 kb on - strand, within Dshi_2549 at 2709.329 kb on + strand at 2709.332 kb on - strand at 2709.333 kb on + strand at 2709.333 kb on + strand at 2709.333 kb on + strand at 2709.334 kb on + strand at 2709.337 kb on - strand at 2709.342 kb on - strand at 2709.371 kb on - strand at 2709.445 kb on + strand at 2709.447 kb on + strand at 2709.490 kb on + strand at 2709.496 kb on - strand at 2709.532 kb on - strand at 2709.581 kb on + strand at 2709.619 kb on - strand at 2709.641 kb on - strand at 2709.725 kb on - strand at 2709.747 kb on + strand at 2709.869 kb on + strand at 2709.896 kb on - strand, within Dshi_2550 at 2709.915 kb on + strand, within Dshi_2550 at 2709.944 kb on + strand, within Dshi_2550 at 2709.952 kb on - strand, within Dshi_2550 at 2709.952 kb on - strand, within Dshi_2550 at 2710.014 kb on + strand, within Dshi_2550 at 2710.023 kb on + strand, within Dshi_2550 at 2710.115 kb on + strand, within Dshi_2550 at 2710.125 kb on + strand, within Dshi_2550 at 2710.144 kb on + strand, within Dshi_2550 at 2710.167 kb on + strand, within Dshi_2550 at 2710.196 kb on + strand, within Dshi_2550 at 2710.204 kb on - strand, within Dshi_2550 at 2710.206 kb on + strand, within Dshi_2550 at 2710.206 kb on + strand, within Dshi_2550 at 2710.237 kb on - strand, within Dshi_2550 at 2710.297 kb on + strand, within Dshi_2550 at 2710.301 kb on + strand, within Dshi_2550 at 2710.303 kb on + strand, within Dshi_2550 at 2710.308 kb on + strand, within Dshi_2550 at 2710.313 kb on + strand, within Dshi_2550 at 2710.313 kb on + strand, within Dshi_2550 at 2710.316 kb on - strand, within Dshi_2550 at 2710.316 kb on - strand, within Dshi_2550 at 2710.316 kb on - strand, within Dshi_2550 at 2710.319 kb on + strand, within Dshi_2550 at 2710.326 kb on + strand, within Dshi_2550 at 2710.327 kb on - strand, within Dshi_2550 at 2710.346 kb on - strand, within Dshi_2550 at 2710.365 kb on + strand, within Dshi_2550 at 2710.377 kb on + strand, within Dshi_2550 at 2710.385 kb on - strand, within Dshi_2550 at 2710.416 kb on + strand, within Dshi_2550 at 2710.416 kb on + strand, within Dshi_2550 at 2710.419 kb on - strand, within Dshi_2550 at 2710.421 kb on + strand, within Dshi_2550 at 2710.424 kb on - strand, within Dshi_2550 at 2710.429 kb on - strand, within Dshi_2550
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 2,707,057 - Dshi_2548 0.79 -0.7 2,707,071 + Dshi_2548 0.79 +0.1 2,707,113 + Dshi_2548 0.80 -0.8 2,707,217 - Dshi_2548 0.83 +2.1 2,707,351 + Dshi_2548 0.86 +1.8 2,707,352 - Dshi_2548 0.86 +0.2 2,707,457 - Dshi_2548 0.88 -0.2 2,707,462 + Dshi_2548 0.88 +1.0 2,707,499 - Dshi_2548 0.89 +0.5 2,707,523 - Dshi_2548 0.90 -0.0 2,707,562 + -1.2 2,707,570 - -0.8 2,707,616 + +1.4 2,707,616 + +0.4 2,707,727 + -0.2 2,707,824 + +0.2 2,707,850 + -0.2 2,707,857 + -0.3 2,707,866 - +0.3 2,707,866 - +0.4 2,707,869 + +0.2 2,707,885 - +0.9 2,707,942 + +0.1 2,708,140 + Dshi_2549 0.12 +0.8 2,708,149 + Dshi_2549 0.13 -0.4 2,708,150 - Dshi_2549 0.13 +0.3 2,708,233 + Dshi_2549 0.19 +0.8 2,708,319 - Dshi_2549 0.25 +0.4 2,708,340 - Dshi_2549 0.26 +1.2 2,708,516 + Dshi_2549 0.38 +0.1 2,708,536 + Dshi_2549 0.39 +1.3 2,708,550 - Dshi_2549 0.40 +0.6 2,708,673 - Dshi_2549 0.48 +0.1 2,708,712 + Dshi_2549 0.51 +0.4 2,708,712 + Dshi_2549 0.51 +0.1 2,708,719 + Dshi_2549 0.51 +0.7 2,708,720 - Dshi_2549 0.51 +0.3 2,708,768 - Dshi_2549 0.55 -0.6 2,708,832 + Dshi_2549 0.59 +0.4 2,708,832 + Dshi_2549 0.59 +0.0 2,708,837 + Dshi_2549 0.59 +0.4 2,708,868 - Dshi_2549 0.61 +0.2 2,708,903 + Dshi_2549 0.64 +0.2 2,708,944 - Dshi_2549 0.67 +1.1 2,709,087 + Dshi_2549 0.76 +0.3 2,709,172 - Dshi_2549 0.82 +0.2 2,709,329 + +0.5 2,709,332 - -1.2 2,709,333 + -0.2 2,709,333 + -0.6 2,709,333 + -0.6 2,709,334 + +0.2 2,709,337 - -0.4 2,709,342 - -0.7 2,709,371 - +1.2 2,709,445 + +0.5 2,709,447 + -0.7 2,709,490 + -0.5 2,709,496 - -0.0 2,709,532 - -1.1 2,709,581 + +0.5 2,709,619 - +0.2 2,709,641 - +0.6 2,709,725 - -0.4 2,709,747 + +1.1 2,709,869 + +0.6 2,709,896 - Dshi_2550 0.10 +0.8 2,709,915 + Dshi_2550 0.10 -0.4 2,709,944 + Dshi_2550 0.11 +0.2 2,709,952 - Dshi_2550 0.11 -0.8 2,709,952 - Dshi_2550 0.11 +0.0 2,710,014 + Dshi_2550 0.13 +0.3 2,710,023 + Dshi_2550 0.13 -0.9 2,710,115 + Dshi_2550 0.15 -0.8 2,710,125 + Dshi_2550 0.15 -0.7 2,710,144 + Dshi_2550 0.16 +1.0 2,710,167 + Dshi_2550 0.16 -0.9 2,710,196 + Dshi_2550 0.17 +0.3 2,710,204 - Dshi_2550 0.17 +0.9 2,710,206 + Dshi_2550 0.17 -0.1 2,710,206 + Dshi_2550 0.17 +0.2 2,710,237 - Dshi_2550 0.18 +0.5 2,710,297 + Dshi_2550 0.19 +0.4 2,710,301 + Dshi_2550 0.19 +0.0 2,710,303 + Dshi_2550 0.19 -0.5 2,710,308 + Dshi_2550 0.19 +0.2 2,710,313 + Dshi_2550 0.19 +0.6 2,710,313 + Dshi_2550 0.19 +2.0 2,710,316 - Dshi_2550 0.20 +0.6 2,710,316 - Dshi_2550 0.20 -0.4 2,710,316 - Dshi_2550 0.20 -0.8 2,710,319 + Dshi_2550 0.20 +2.5 2,710,326 + Dshi_2550 0.20 -0.3 2,710,327 - Dshi_2550 0.20 -1.1 2,710,346 - Dshi_2550 0.20 +0.3 2,710,365 + Dshi_2550 0.21 +0.1 2,710,377 + Dshi_2550 0.21 +0.6 2,710,385 - Dshi_2550 0.21 +0.5 2,710,416 + Dshi_2550 0.22 +0.8 2,710,416 + Dshi_2550 0.22 -1.4 2,710,419 - Dshi_2550 0.22 +0.5 2,710,421 + Dshi_2550 0.22 +0.3 2,710,424 - Dshi_2550 0.22 -0.2 2,710,429 - Dshi_2550 0.22 +0.8
Or see this region's nucleotide sequence