Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2036 and Dshi_2037 are separated by 15 nucleotides Dshi_2037 and Dshi_2038 are separated by 12 nucleotides Dshi_2038 and Dshi_2039 are separated by 53 nucleotides
Dshi_2036: Dshi_2036 - Alcohol dehydrogenase GroES domain protein (RefSeq), at 2,155,779 to 2,156,762
_2036
Dshi_2037: Dshi_2037 - hypothetical protein (RefSeq), at 2,156,778 to 2,157,068
_2037
Dshi_2038: Dshi_2038 - Altronate dehydratase (RefSeq), at 2,157,081 to 2,158,262
_2038
Dshi_2039: Dshi_2039 - Malate/L-lactate dehydrogenase (RefSeq), at 2,158,316 to 2,159,335
_2039
Position (kb)
2157
2158
2159 Strain fitness (log2 ratio)
-2
-1
0
1 at 2156.182 kb on - strand, within Dshi_2036 at 2156.425 kb on - strand at 2156.511 kb on - strand, within Dshi_2036 at 2156.531 kb on - strand, within Dshi_2036 at 2156.556 kb on + strand, within Dshi_2036 at 2156.702 kb on + strand at 2156.710 kb on - strand at 2156.718 kb on + strand at 2156.849 kb on + strand, within Dshi_2037 at 2156.873 kb on - strand, within Dshi_2037 at 2156.893 kb on - strand, within Dshi_2037 at 2156.954 kb on + strand, within Dshi_2037 at 2156.962 kb on - strand, within Dshi_2037 at 2157.031 kb on - strand, within Dshi_2037 at 2157.159 kb on - strand at 2157.237 kb on - strand, within Dshi_2038 at 2157.307 kb on + strand, within Dshi_2038 at 2157.326 kb on - strand, within Dshi_2038 at 2157.358 kb on + strand, within Dshi_2038 at 2157.664 kb on - strand, within Dshi_2038 at 2157.818 kb on + strand, within Dshi_2038 at 2157.875 kb on + strand, within Dshi_2038 at 2157.887 kb on + strand, within Dshi_2038 at 2157.905 kb on + strand, within Dshi_2038 at 2157.905 kb on + strand, within Dshi_2038 at 2158.183 kb on + strand at 2158.332 kb on + strand at 2158.399 kb on + strand at 2158.417 kb on - strand at 2158.432 kb on + strand, within Dshi_2039 at 2158.440 kb on - strand, within Dshi_2039 at 2158.598 kb on + strand, within Dshi_2039 at 2158.661 kb on + strand, within Dshi_2039 at 2158.766 kb on + strand, within Dshi_2039 at 2158.817 kb on + strand, within Dshi_2039 at 2158.830 kb on - strand, within Dshi_2039 at 2158.864 kb on + strand, within Dshi_2039 at 2158.864 kb on + strand, within Dshi_2039 at 2159.180 kb on - strand, within Dshi_2039
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 2,156,182 - Dshi_2036 0.41 +1.0 2,156,425 - -0.2 2,156,511 - Dshi_2036 0.74 -0.5 2,156,531 - Dshi_2036 0.76 -0.8 2,156,556 + Dshi_2036 0.79 +0.2 2,156,702 + +0.2 2,156,710 - +0.3 2,156,718 + -1.0 2,156,849 + Dshi_2037 0.24 -0.2 2,156,873 - Dshi_2037 0.33 +0.3 2,156,893 - Dshi_2037 0.40 -0.1 2,156,954 + Dshi_2037 0.60 +1.1 2,156,962 - Dshi_2037 0.63 +0.6 2,157,031 - Dshi_2037 0.87 +0.3 2,157,159 - +0.5 2,157,237 - Dshi_2038 0.13 +0.4 2,157,307 + Dshi_2038 0.19 +0.2 2,157,326 - Dshi_2038 0.21 +0.2 2,157,358 + Dshi_2038 0.23 +0.8 2,157,664 - Dshi_2038 0.49 +1.1 2,157,818 + Dshi_2038 0.62 +1.1 2,157,875 + Dshi_2038 0.67 +0.1 2,157,887 + Dshi_2038 0.68 +1.1 2,157,905 + Dshi_2038 0.70 -0.7 2,157,905 + Dshi_2038 0.70 +0.4 2,158,183 + -0.4 2,158,332 + -0.2 2,158,399 + -0.9 2,158,417 - +0.7 2,158,432 + Dshi_2039 0.11 +0.3 2,158,440 - Dshi_2039 0.12 +0.0 2,158,598 + Dshi_2039 0.28 +0.9 2,158,661 + Dshi_2039 0.34 +0.5 2,158,766 + Dshi_2039 0.44 -0.2 2,158,817 + Dshi_2039 0.49 +0.2 2,158,830 - Dshi_2039 0.50 +0.8 2,158,864 + Dshi_2039 0.54 -1.1 2,158,864 + Dshi_2039 0.54 -1.9 2,159,180 - Dshi_2039 0.85 +0.2
Or see this region's nucleotide sequence