Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1591
Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Dimethyl Sulfoxide 7.5 vol% |
---|---|---|---|---|---|
remove | |||||
1,656,566 | - | Dshi_1590 | 0.20 | +0.6 | |
1,656,623 | + | Dshi_1590 | 0.25 | -0.1 | |
1,656,623 | + | Dshi_1590 | 0.25 | -0.9 | |
1,656,623 | + | Dshi_1590 | 0.25 | -0.4 | |
1,656,633 | + | Dshi_1590 | 0.26 | +0.4 | |
1,656,802 | - | Dshi_1590 | 0.41 | -0.2 | |
1,657,072 | - | Dshi_1590 | 0.65 | -0.3 | |
1,657,337 | + | Dshi_1590 | 0.88 | +0.4 | |
1,657,371 | + | -0.0 | |||
1,657,440 | - | +0.5 | |||
1,657,480 | + | +0.1 | |||
1,657,486 | + | +0.2 | |||
1,657,557 | + | +0.2 | |||
1,657,565 | - | -0.5 | |||
1,657,596 | + | -0.7 | |||
1,657,707 | - | Dshi_1591 | 0.16 | +0.2 | |
1,658,098 | - | Dshi_1591 | 0.58 | +0.4 | |
1,658,098 | - | Dshi_1591 | 0.58 | +0.6 | |
1,658,179 | - | Dshi_1591 | 0.67 | +0.6 | |
1,658,208 | + | Dshi_1591 | 0.70 | +0.5 | |
1,658,216 | - | Dshi_1591 | 0.71 | -0.3 | |
1,658,221 | - | Dshi_1591 | 0.72 | -0.2 | |
1,658,284 | + | Dshi_1591 | 0.79 | +1.3 | |
1,658,292 | - | Dshi_1591 | 0.79 | +0.3 | |
1,658,361 | - | Dshi_1591 | 0.87 | +0.3 | |
1,658,410 | + | +0.8 |
Or see this region's nucleotide sequence